PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021273714.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 340aa MW: 39240.7 Da PI: 4.7253 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 180.1 | 5.6e-56 | 9 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_021273714.1 9 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQErcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAV 102 69****************************.9***************953432233667************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k++l+g++ktLvfykgrap+g+ktdW+mheyrle XP_021273714.1 103 YD-KSKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 138 **.999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
MMESMESCVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQERCRI 60 GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK AVYDKSKLIG MRKTLVFYKG 120 RAPNGQKTDW IMHEYRLESD ENGPPQEEGW VVCRAFKKRT SGNGQSKSIE GWDSSYFYDE 180 PSGVSSVVDP IDYISRQPQS FLPQSFLCKQ ETEADNLNFI HSDQFVQLPQ LESPSLPLIK 240 RPSSISLISE NTSYEEEEQN RMCNTTNKVT DWRALDKFVA SQLSQEDRYD GEGVPSFEAN 300 NNSDMALLLL QSSGREEGNK LNEFLNSSSD CDIGICIFDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18060.1 | 1e-159 | NAC family protein |