PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021273624.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 825aa MW: 89429.2 Da PI: 7.2999

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021273624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3e-09	571	608	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + XP_021273624.1 571 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 608 664459******************************88 PP
2	BELL	122.8	1.4e-39	431	502	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+l+eVd+rY++y+eq+q+v++sF+ v+g g+a pYt+lA+ka+SrhFrcLkdai+ q+ XP_021273624.1 431 DRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAISAQL 502 589******************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 825 aa Download sequence
MGIATPPLVP AILSHHSKTL HQIPIQDKSN NSTNSMSQDY HQATAGIFSF SNGFERPAVN 60 HQEHQQQQQQ HHFAQQIRRD KLRVQGFEPP PPPLIGIDEE ESNALPVYET AGMLSEMFNF 120 PSGVAAAATA STELLDQPVQ PNYRAHRPPG NTSEWYNNRQ GVVGGLGQLG ESKSHNNRDS 180 LAQQHHQQLP SINADSAAAM HLFLMNPQPR SPSPPPATTS NTLHMLLPNP SSSLQGFNVS 240 GPGGAFGTST VLSPPQFTWV PDSAHEGGTT GSQLNNPSEI GGVVEGQGLS LSLSSSLQHL 300 EAAKAEELRM GDGGLLYYNQ GGGSSSAAQF QYKGLGNHHQ PLHLQGVGQN HQVHVGFGSS 360 LGMVNVLRNS KYVKAAQELL EEFCSVGRGQ FKKNKFGRNN TNPSSNPGSS GGGGGGSSSS 420 TKDLPPLSAA DRIEHQRRKV KLLSMLDEVD RRYNHYCEQM QMVVNSFDLV MGFGAAVPYT 480 ALAQKAMSRH FRCLKDAISA QLKHSCELLG EKDGAGTSGI TKGETPRLKM LEQSLRQQRA 540 FHQMGMMEQE AWRPQRGLPE RSVNILRAWL FEHFLHPYPS DADKHLLARQ TGLSRNQVSN 600 WFINARVRLW KPMVEEMYQQ ETKEDETDKE RERNPNNSNN NSNNAQTSTP STTAAAAAAA 660 TAASTPTTTT TATTTTTPAG KRSEINAMEN DPSFIAINRQ CFSENQAKQC TPNTTTTTII 720 SSPPTTTTSP TNNTATEVAP PISQPFTTNH DSDMHHRIAG VEDTCRRGSI VTADYGTTSG 780 NTDIGSTLIR FGTTAGDVSL TLGLRHAGNM PEKSSSFSVR DFGGC

Sequence ? help Back to Top

Protein Sequence Length: 825 aa Download sequence

MGIATPPLVP AILSHHSKTL HQIPIQDKSN NSTNSMSQDY HQATAGIFSF SNGFERPAVN  60
HQEHQQQQQQ HHFAQQIRRD KLRVQGFEPP PPPLIGIDEE ESNALPVYET AGMLSEMFNF  120
PSGVAAAATA STELLDQPVQ PNYRAHRPPG NTSEWYNNRQ GVVGGLGQLG ESKSHNNRDS  180
LAQQHHQQLP SINADSAAAM HLFLMNPQPR SPSPPPATTS NTLHMLLPNP SSSLQGFNVS  240
GPGGAFGTST VLSPPQFTWV PDSAHEGGTT GSQLNNPSEI GGVVEGQGLS LSLSSSLQHL  300
EAAKAEELRM GDGGLLYYNQ GGGSSSAAQF QYKGLGNHHQ PLHLQGVGQN HQVHVGFGSS  360
LGMVNVLRNS KYVKAAQELL EEFCSVGRGQ FKKNKFGRNN TNPSSNPGSS GGGGGGSSSS  420
TKDLPPLSAA DRIEHQRRKV KLLSMLDEVD RRYNHYCEQM QMVVNSFDLV MGFGAAVPYT  480
ALAQKAMSRH FRCLKDAISA QLKHSCELLG EKDGAGTSGI TKGETPRLKM LEQSLRQQRA  540
FHQMGMMEQE AWRPQRGLPE RSVNILRAWL FEHFLHPYPS DADKHLLARQ TGLSRNQVSN  600
WFINARVRLW KPMVEEMYQQ ETKEDETDKE RERNPNNSNN NSNNAQTSTP STTAAAAAAA  660
TAASTPTTTT TATTTTTPAG KRSEINAMEN DPSFIAINRQ CFSENQAKQC TPNTTTTTII  720
SSPPTTTTSP TNNTATEVAP PISQPFTTNH DSDMHHRIAG VEDTCRRGSI VTADYGTTSG  780
NTDIGSTLIR FGTTAGDVSL TLGLRHAGNM PEKSSSFSVR DFGGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-160	TALE family protein