PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021273524.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 580aa MW: 62748 Da PI: 7.1126 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.1 | 7.6e-09 | 384 | 431 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k Ka +L + ++Y++sLq XP_021273524.1 384 SHSLAERVRREKISERMKLLQNLVPGC----NKVTGKALMLDEIINYVQSLQ 431 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 580 aa Download sequence |
MENQFFLNAG IPPPARPLHF GPSLSSPMPA WQSLSSAMEI QATEMNCSPG QSQDCFLNPH 60 WEKSTDYGLQ FDSALSSMVS SPAASNSNIS NESFMIRELI GKLGSIGNSG EISPHSQPLL 120 ASYLNGPNST NTSCYSTPLN SPPKLNLPMM DSLVKEKLPS LGKSMGLNSS VAEFSADPGF 180 AERAAKFSCF GSRSFNGRTS QLGLNNNNEI VAYRSNPLRA DTKLPRVSSS PSLKAMGSQV 240 GGAQGANKNS PLQDRSELAN SQEESTVSEQ NPNGDPGLKA SKGLTSRKRK AVPKAKTKET 300 SASPSANAAK VHEPNEESNE KRCKSTEGNG NEHDSVKAEE EAKGNNGNAG DEKQNKTNNN 360 NTKPPEPPKD YIHVRARRGQ ATDSHSLAER VRREKISERM KLLQNLVPGC NKVTGKALML 420 DEIINYVQSL QRQVEFLSMK LASVNTRLDF NVDSLMSKDT FQSNATLPHP IFPIDSSSAS 480 AFFGHQPQQN PALHSNLSNG TTMTQCSVDP LDTAICPNLT THLPPINQFA QIVPQYPTLC 540 EGDLQTVVQM GYGQNPSQEM AIQSENLQGS NQVSHMKVEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07340.1 | 1e-116 | bHLH family protein |