PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021273524.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 580aa    MW: 62748 Da    PI: 7.1126
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021273524.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.6e-09384431455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  XP_021273524.1 384 SHSLAERVRREKISERMKLLQNLVPGC----NKVTGKALMLDEIINYVQSLQ 431
                     8*************************9....677*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    
MENQFFLNAG IPPPARPLHF GPSLSSPMPA WQSLSSAMEI QATEMNCSPG QSQDCFLNPH  60
WEKSTDYGLQ FDSALSSMVS SPAASNSNIS NESFMIRELI GKLGSIGNSG EISPHSQPLL  120
ASYLNGPNST NTSCYSTPLN SPPKLNLPMM DSLVKEKLPS LGKSMGLNSS VAEFSADPGF  180
AERAAKFSCF GSRSFNGRTS QLGLNNNNEI VAYRSNPLRA DTKLPRVSSS PSLKAMGSQV  240
GGAQGANKNS PLQDRSELAN SQEESTVSEQ NPNGDPGLKA SKGLTSRKRK AVPKAKTKET  300
SASPSANAAK VHEPNEESNE KRCKSTEGNG NEHDSVKAEE EAKGNNGNAG DEKQNKTNNN  360
NTKPPEPPKD YIHVRARRGQ ATDSHSLAER VRREKISERM KLLQNLVPGC NKVTGKALML  420
DEIINYVQSL QRQVEFLSMK LASVNTRLDF NVDSLMSKDT FQSNATLPHP IFPIDSSSAS  480
AFFGHQPQQN PALHSNLSNG TTMTQCSVDP LDTAICPNLT THLPPINQFA QIVPQYPTLC  540
EGDLQTVVQM GYGQNPSQEM AIQSENLQGS NQVSHMKVEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.11e-116bHLH family protein