PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23205.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family AP2
Protein Properties Length: 671aa    MW: 73851.3 Da    PI: 7.0039
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23205.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.61.3e-07239307155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng........kr.....krfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  +   g         +     k++  g ++ +e+Aa+a++ a++k++g
  PIN23205.1 239 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtrkgrqdYCilfvlKNVL-GGYDNEEKAARAYDLAALKYWG 307
                 57*******************76667336776777733566778876.669999**************98 PP

2AP222.33.4e-07350383137
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfg 37 
                 s y+GV+++++ grW A+I  +     +k  +lg+f 
  PIN23205.1 350 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFS 383
                 57****************988532...5*******96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    
MASMNNWLGF SLSPHELPPQ PHQRNHSQGN SVFNSDEISA VQVSGPCFDL TSASPNIPSL  60
NLPAPFGILE AFNRNSTLSQ HDWNHVKDVG MTSFSCSSHN MENQERPKLE NFLGVAGHAV  120
ADHQLNGNDN SYNNLYQETE VTSHTNTSGG DINGSNSTIG LSMIKNWLRN NPAPSHTAEN  180
KVGNEAVPPQ GSQTLSLSMS TGSQSNVCAS DNGKAVDSTQ TGADSVPRKS IDTFGQRTSI  240
YRGVTRHRWT GRYEAHLWDN SCRREGQTRK GRQDYCILFV LKNVLGGYDN EEKAARAYDL  300
AALKYWGTTT TTNFPISNYE KEIEEMKHMT RQEYVASLRR KSSGFSRGAS IYRGVTRHHQ  360
HGRWQARIGR VAGNKDLYLG TFSNHLLNYS LISFLSYVFP LKLFLIFKSI SKQGTQEEAA  420
EAYDIAAIKF RGLNAVTNFE ISRYDVKSIL ESSTLPIGGA AKRLKDAENA ETARANEGNL  480
NLHLIDGHIN NGYGIGTTNH GWFQQAQPLS MYPYAHQRFW CKQEQDSDIG FNDIHQLGNT  540
QNFLQPSVLH NLMSLDSCSS GSNSHVIYGN NGSGDGPNGG SFGVPMIETV IVQDGNQNHA  600
NGYLGNDEGI FGSTDAYQQA RNLYYQSHQS SLSNGIAKAG VYSDPGSTNN WIPTAVPTLA  660
ARTNGVVWND T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17430.11e-139AP2 family protein