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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN23205.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | AP2 | ||||||||
Protein Properties | Length: 671aa MW: 73851.3 Da PI: 7.0039 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23.6 | 1.3e-07 | 239 | 307 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng........kr.....krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g + k++ g ++ +e+Aa+a++ a++k++g PIN23205.1 239 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtrkgrqdYCilfvlKNVL-GGYDNEEKAARAYDLAALKYWG 307 57*******************76667336776777733566778876.669999**************98 PP | |||||||
2 | AP2 | 22.3 | 3.4e-07 | 350 | 383 | 1 | 37 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfg 37 s y+GV+++++ grW A+I + +k +lg+f PIN23205.1 350 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFS 383 57****************988532...5*******96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 671 aa Download sequence |
MASMNNWLGF SLSPHELPPQ PHQRNHSQGN SVFNSDEISA VQVSGPCFDL TSASPNIPSL 60 NLPAPFGILE AFNRNSTLSQ HDWNHVKDVG MTSFSCSSHN MENQERPKLE NFLGVAGHAV 120 ADHQLNGNDN SYNNLYQETE VTSHTNTSGG DINGSNSTIG LSMIKNWLRN NPAPSHTAEN 180 KVGNEAVPPQ GSQTLSLSMS TGSQSNVCAS DNGKAVDSTQ TGADSVPRKS IDTFGQRTSI 240 YRGVTRHRWT GRYEAHLWDN SCRREGQTRK GRQDYCILFV LKNVLGGYDN EEKAARAYDL 300 AALKYWGTTT TTNFPISNYE KEIEEMKHMT RQEYVASLRR KSSGFSRGAS IYRGVTRHHQ 360 HGRWQARIGR VAGNKDLYLG TFSNHLLNYS LISFLSYVFP LKLFLIFKSI SKQGTQEEAA 420 EAYDIAAIKF RGLNAVTNFE ISRYDVKSIL ESSTLPIGGA AKRLKDAENA ETARANEGNL 480 NLHLIDGHIN NGYGIGTTNH GWFQQAQPLS MYPYAHQRFW CKQEQDSDIG FNDIHQLGNT 540 QNFLQPSVLH NLMSLDSCSS GSNSHVIYGN NGSGDGPNGG SFGVPMIETV IVQDGNQNHA 600 NGYLGNDEGI FGSTDAYQQA RNLYYQSHQS SLSNGIAKAG VYSDPGSTNN WIPTAVPTLA 660 ARTNGVVWND T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17430.1 | 1e-139 | AP2 family protein |