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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN22314.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | AP2 | ||||||||
Protein Properties | Length: 500aa MW: 55274.8 Da PI: 6.7011 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.8 | 4e-11 | 186 | 242 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d + ++ ++ k + g ++ +++Aa+a++ a++k++g PIN22314.1 186 SQFRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEDKAARAYDLAALKYWG 242 789******************433.44555535555.7799999*************98 PP | |||||||
2 | AP2 | 46.7 | 7.9e-15 | 287 | 336 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PIN22314.1 287 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 336 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 500 aa Download sequence |
MPLRSDSSFS VLDSKHYWRY DNDMNGPNQN EEAPKFEDFL GCCYSNSPPN EPGEINMNMP 60 PNLSSACDDH KGENFTTPSL YFQPYNYSVA AANPEGVYFG GAVADGGGDG GTSGSGFKSW 120 FPHTEKPVVE GSRICDFQTL SLTVSHSSQP DIPTAVADGK KRVAAKSSVK EPVPRKSIDT 180 FGQRTSQFRG VTRHRWTGRY EAHLWDNSCR KEGQTRKGRQ GGYDKEDKAA RAYDLAALKY 240 WGPTTHINFP LSTYEKELEE MKNMSMQEFV AHLRRKSSGF SRGASMYRGV TRHHQHGRWQ 300 ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGTSAV TNFDISRYDV KRICSSSTLI 360 AGDLAKRSPK DTVGPSSVED YNSCASSASP QAFLRITNGE SNSDELAEMM WNASSDEQGS 420 QNEQPAKDNS RPGPGSRCSS GPPSPKRSDM GPARMDDEFS QAYYSLEGQK YVDGSDHMSS 480 NRVPDMGLVH QAPIFALWND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-128 | AP2 family protein |