PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21803.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family AP2
Protein Properties Length: 455aa    MW: 49075.6 Da    PI: 8.0464
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.8e-17161210155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  PIN21803.1 161 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHTAARAYDRAAIKFRG 210
                 78*******************......55************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    
MLDLNIDAGF SGDSASCEDE ADKMAINAAD VDSLTSTTTS ATNNAAFVSA VDELESSSST  60
LRNSVSGLNF SILHENVIGI GADANNGVVN HRTELQLFPV GSLPSSPVVD RSKYWLNLSL  120
TEASGGGGVE LGIFKTQLPS NNTVQQPPVK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW  180
DCGKQVYLGG FDTAHTAARA YDRAAIKFRG VDADINFNIG DYEEDMKQMK NLTKEEFVQI  240
LRCQSNGLSR GTQKYRGVTI NKCGQLEAQM GQFVGKKDYD KATIICNQIE ESHSYKKEMN  300
STCTDGGNGR SLDLNLGISL ASDGLQRNDS TKNLRFPYGT SESPDGKRVK VQTSSAYSHG  360
VLMTSKCTPK GAVIYSGFSP NTKERAMAMS AGAIPLPDFS NWPLKMQGHG MVNSIPFLSS  420
AASSGFSSTS SAYSNSIVSS TTGPQSLATA FNTFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.22e-69AP2 family protein