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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN21803.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | AP2 | ||||||||
Protein Properties | Length: 455aa MW: 49075.6 Da PI: 8.0464 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 6.8e-17 | 161 | 210 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PIN21803.1 161 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHTAARAYDRAAIKFRG 210 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence |
MLDLNIDAGF SGDSASCEDE ADKMAINAAD VDSLTSTTTS ATNNAAFVSA VDELESSSST 60 LRNSVSGLNF SILHENVIGI GADANNGVVN HRTELQLFPV GSLPSSPVVD RSKYWLNLSL 120 TEASGGGGVE LGIFKTQLPS NNTVQQPPVK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW 180 DCGKQVYLGG FDTAHTAARA YDRAAIKFRG VDADINFNIG DYEEDMKQMK NLTKEEFVQI 240 LRCQSNGLSR GTQKYRGVTI NKCGQLEAQM GQFVGKKDYD KATIICNQIE ESHSYKKEMN 300 STCTDGGNGR SLDLNLGISL ASDGLQRNDS TKNLRFPYGT SESPDGKRVK VQTSSAYSHG 360 VLMTSKCTPK GAVIYSGFSP NTKERAMAMS AGAIPLPDFS NWPLKMQGHG MVNSIPFLSS 420 AASSGFSSTS SAYSNSIVSS TTGPQSLATA FNTFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 2e-69 | AP2 family protein |