PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21625.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

AP2

Protein Properties

Length: 579aa MW: 64521.3 Da PI: 6.4011

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.5	1.2e-11	206	262	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++ g++ k + g ++ +e+Aa+a++ a++k++g PIN21625.1 206 SIYRGVTRHRWTGRYEAHLWDnSCKrEGQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 262 57*****************88885445536655.779999************98 PP
2	AP2	43.7	6.8e-14	305	356	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+ +++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PIN21625.1 305 SIYRGVTSHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 356 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MTSINNWLGF SSLSPQLENH SQNSPVSQLG LDHEISACAD QCFDTTNNIN IIPSLNFPPF 60 SIFEAFNTST TTAHSQDWSM KDMGAQNDEE TPKLENFLGQ TFVENNEEEN KLHHMSQSCF 120 QPYTCVGLSM IKNWQRNNPS APPPHAADNK VGGEAAAPPG NAQSLSLSMS TGLLQSSDSK 180 LQSTAAESNI ESVPRKCVDT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCK REGQTRKGRQ 240 GGYDKEEKAA RAYDLAALKY WGTTTTTNFP ISNYEKEMEE MKHMTRQEYI ASLRRKSSGF 300 SRGASIYRGV TSHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLSAV 360 TNFEISRYEV KSILESPTLP IGGAAKRLKD AQNAEMALQM HLANESSNLS LHLTDIHNGY 420 GNLPTIAFHQ SQMSPFVHQR MWMKQEQDLD IGDIHHQLQV GNTQNHLMHN MMSLQSDQSS 480 NSNFVVHGNY GEENGMNESN FMVPMMGNND EEKPYGYEGL FGSSDGRNLY YQSHKVSLSN 540 GIAKSGVFND QGSTCNNWIS SGVPTLAAGP STFTVWNET

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MTSINNWLGF SSLSPQLENH SQNSPVSQLG LDHEISACAD QCFDTTNNIN IIPSLNFPPF  60
SIFEAFNTST TTAHSQDWSM KDMGAQNDEE TPKLENFLGQ TFVENNEEEN KLHHMSQSCF  120
QPYTCVGLSM IKNWQRNNPS APPPHAADNK VGGEAAAPPG NAQSLSLSMS TGLLQSSDSK  180
LQSTAAESNI ESVPRKCVDT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCK REGQTRKGRQ  240
GGYDKEEKAA RAYDLAALKY WGTTTTTNFP ISNYEKEMEE MKHMTRQEYI ASLRRKSSGF  300
SRGASIYRGV TSHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLSAV  360
TNFEISRYEV KSILESPTLP IGGAAKRLKD AQNAEMALQM HLANESSNLS LHLTDIHNGY  420
GNLPTIAFHQ SQMSPFVHQR MWMKQEQDLD IGDIHHQLQV GNTQNHLMHN MMSLQSDQSS  480
NSNFVVHGNY GEENGMNESN FMVPMMGNND EEKPYGYEGL FGSSDGRNLY YQSHKVSLSN  540
GIAKSGVFND QGSTCNNWIS SGVPTLAAGP STFTVWNET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-143	AP2 family protein