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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN21348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 277aa MW: 31566.8 Da PI: 9.3787 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.3 | 3.2e-31 | 25 | 74 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ PIN21348.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 74 79***********************************************8 PP | |||||||
2 | K-box | 101.1 | 1.5e-33 | 92 | 189 | 3 | 100 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +s+++s++ea+++ +qqe++kL+++i+ +q+++R++lGe+++ Lslk+L+++e ++ek++++iRskKnell+++ie +qk+e el+++n+ Lr+k+ e PIN21348.1 92 SSNSVSTSEANTQFYQQEANKLRRQIRDIQNSNRQILGEGVGGLSLKDLKSMEGKVEKAISRIRSKKNELLFAEIELMQKRELELHNANMFLRAKITE 189 45556699***************************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MAFPNQESES SNSLRKNGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA 60 LIVFSTRGRL YEYANNSVRA TIEKYKKASA DSSNSVSTSE ANTQFYQQEA NKLRRQIRDI 120 QNSNRQILGE GVGGLSLKDL KSMEGKVEKA ISRIRSKKNE LLFAEIELMQ KRELELHNAN 180 MFLRAKITES ERAQEQMNLM PAGTEYHQPM TSSQSYDVHN FLPMTLMEPN HHYSCHDQTP 240 LQLVYVDVVT MGKAKAPGYN QEVSVMARNL GDEYVVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-107 | MIKC_MADS family protein |