PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17675.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 232aa    MW: 26876.7 Da    PI: 9.8223
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.21e-281059251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                ri+n++ rqvtfskRrng+lKKA+ELS+LCdaev +iifsstgkly+++s
  PIN17675.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIIFSSTGKLYDFAS 59
                8***********************************************86 PP

2K-box812.8e-27821711099
       K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                  +++ + +q e+a+L+++++ Lq+++++l+Ge+L  Ls ++Lq+Le+qLe+slk +R kK+++l+++ieel +k + +++en +L+kk++
  PIN17675.1  82 PTSEIKFWQSEAARLRQQLQYLQESHKQLMGEQLYGLSTEDLQNLENQLERSLKGVRMKKQQILTDEIEELNRKGNLINQENIELNKKIN 171
                 567899*********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCD AEVGLIIFSS TGKLYDFASS  60
SMKSVIERYN KMKEEHYHLL NPTSEIKFWQ SEAARLRQQL QYLQESHKQL MGEQLYGLST  120
EDLQNLENQL ERSLKGVRMK KQQILTDEIE ELNRKGNLIN QENIELNKKI NHFQKENAEL  180
HKKVYGPGGI SEANRVPHIT RVINECDMHI HTNLELCQSQ NQKKQAAQNV MG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.12e-90MIKC_MADS family protein