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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16718.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | AP2 | ||||||||
Protein Properties | Length: 413aa MW: 44935 Da PI: 8.0724 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.9e-17 | 160 | 209 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PIN16718.1 160 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 209 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 413 aa Download sequence |
MLDLNVGAVF PVGSTSCDDE ADIHNTATAD SVTSTTTSTT NNAAFAPVDE VDCNSSTVKN 60 SPSTFNFSIL NKNVIEIEDD VNNGITNNIN ELQLFPMGTQ SESPSLSAAR AKYWLNLSAP 120 EVADCGGVEL GMYTAQLPVS NHVQQPQVKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD 180 CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFTISD YDEDMTQMKN LTKEEFVHIL 240 RRQSNGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKAYDK AAIKCNGREA ITNFELSSGS 300 GLDLNLGISL SLDGPQGNHT SQNLHFPHAS NELPDAKRLK GRATKTGAEV VPLSGCTNWP 360 WKTPSHGVVS PRPLFSSSAA SSGFSSATSP YLNSLMSMTS QPQFSAAAFD SLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 3e-80 | AP2 family protein |