PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16718.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family AP2
Protein Properties Length: 413aa    MW: 44935 Da    PI: 8.0724
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16718.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.9e-17160209155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  PIN16718.1 160 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 209
                 78*******************......55************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    
MLDLNVGAVF PVGSTSCDDE ADIHNTATAD SVTSTTTSTT NNAAFAPVDE VDCNSSTVKN  60
SPSTFNFSIL NKNVIEIEDD VNNGITNNIN ELQLFPMGTQ SESPSLSAAR AKYWLNLSAP  120
EVADCGGVEL GMYTAQLPVS NHVQQPQVKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD  180
CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFTISD YDEDMTQMKN LTKEEFVHIL  240
RRQSNGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKAYDK AAIKCNGREA ITNFELSSGS  300
GLDLNLGISL SLDGPQGNHT SQNLHFPHAS NELPDAKRLK GRATKTGAEV VPLSGCTNWP  360
WKTPSHGVVS PRPLFSSSAA SSGFSSATSP YLNSLMSMTS QPQFSAAAFD SLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.23e-80AP2 family protein