PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16605.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

AP2

Protein Properties

Length: 437aa MW: 48326 Da PI: 6.6982

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.8	2.4e-17	144	193	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PIN16605.1 144 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAARAYDRAAIKFRG 193 78*****************......55**********************997 PP
2	AP2	43	1.1e-13	236	286	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ + +g PIN16605.1 236 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDTEVEAARAYDKAAIRCNG 286 89******.7**5553..2.26******99********98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MFDLNLSVDF NGNENFTADR SAEQSPATSL SSVVNADGGE TSSSNEDTCS TRAASPGGDN 60 TTFTFNFNFL GNNDPAGGEH GAESGLVTRE LFPVSRLSEL NLGRQIGEPV HLRFDHGPPV 120 QEKQQEVQQV QAKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY LGGFDTALAA 180 ARAYDRAAIK FRGVDADINF NLSDYEEDMK QTKNMSKEEF VHILRRQSSG FSRGSSKYRG 240 VTLHKCGRWE ARMGQFLGKK YIYLGLFDTE VEAARAYDKA AIRCNGRDAV TNFEPSSYDH 300 QPSHDQGLDL NLGISSTSCP KESGNWDPFQ CHPYEVQNAR IFKQNVEICG GTVQGVTSEH 360 PIFAANYDQE RAAEQGAQVG KWAWQMHGTQ IAASSGFSSS GASSHQTALN LCFSSYPNTP 420 TSTSQYYSYI SPSLPHP

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MFDLNLSVDF NGNENFTADR SAEQSPATSL SSVVNADGGE TSSSNEDTCS TRAASPGGDN  60
TTFTFNFNFL GNNDPAGGEH GAESGLVTRE LFPVSRLSEL NLGRQIGEPV HLRFDHGPPV  120
QEKQQEVQQV QAKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY LGGFDTALAA  180
ARAYDRAAIK FRGVDADINF NLSDYEEDMK QTKNMSKEEF VHILRRQSSG FSRGSSKYRG  240
VTLHKCGRWE ARMGQFLGKK YIYLGLFDTE VEAARAYDKA AIRCNGRDAV TNFEPSSYDH  300
QPSHDQGLDL NLGISSTSCP KESGNWDPFQ CHPYEVQNAR IFKQNVEICG GTVQGVTSEH  360
PIFAANYDQE RAAEQGAQVG KWAWQMHGTQ IAASSGFSSS GASSHQTALN LCFSSYPNTP  420
TSTSQYYSYI SPSLPHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	3e-93	AP2 family protein