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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16333.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | AP2 | ||||||||
Protein Properties | Length: 405aa MW: 46388.9 Da PI: 8.0526 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.9 | 3.9e-11 | 66 | 122 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ ++++gr++A+++d s+n k+k + g ++ +e Aa+a++ a++k++g PIN16333.1 66 SRFRGVSKHRWTGRYEAHLWDkLSWNVtqKKKGKQ-GAYDDEEAAARAYDLAALKYWG 122 789******************88887784446666.99***9**************98 PP | |||||||
2 | AP2 | 29.4 | 1.9e-09 | 165 | 202 | 1 | 41 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaee 41 s+y+GV +++ +grW+A+I + g +k+ +lg++ +ee PIN16333.1 165 SRYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNLPEE 202 79****99**********99966...3.6*********9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
MPMRMIKSEE TFESSFMSLV DTASEEKCIK RRRRDSAAAI LTCTQQQTEN ENVNPKSAAK 60 TVKRSSRFRG VSKHRWTGRY EAHLWDKLSW NVTQKKKGKQ GAYDDEEAAA RAYDLAALKY 120 WGTSTFTNFP ISDYEKEIEI MQTVTKEEYL ASLRRRSSGF SRGVSRYRGV ARHHHNGRWE 180 ARIGRVFGNK YLYLGTYNLP EEYKQISEHF LSDIKVTYLF IGTQEEAARA YDIAAIEYRG 240 INAVTNFDLS NYIRWLKPGA NISVPAQETK QSTDFVAREE SLSPSLKRKA FSADDLQENF 300 ISKLPISQCG RSSPTALGLL LRSSVFRELL EKTSNVSEED SDCENTKNQA HMGRDDECRG 360 IFSERSEDIP FAVSTSGHRI ELQEQLHFDY NCLDMVGTWP PCTSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 3e-59 | AP2 family protein |