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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16095.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 248aa MW: 28702.8 Da PI: 8.2151 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.4 | 5.1e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+ KKA+E+SvLCdaeva+i+fs++gkl+eys+ PIN16095.1 9 KRIENKINRQVTFSKRRGGLVKKAHEISVLCDAEVALIVFSHKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 109.3 | 4.2e-36 | 87 | 174 | 13 | 100 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++++ e++kLk++i+ Lqr+qRh++GedL+s+slk+Lq+LeqqL+ +lk+iRs+Kn+ll+++i+elq+ke+++qe+n +L+k+++e PIN16095.1 87 PPANWNLEYSKLKARIDLLQRNQRHYMGEDLDSMSLKDLQNLEQQLDIALKSIRSRKNQLLYDSISELQQKERAIQEQNSMLTKQIKE 174 5679*********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGRGKVELKR IENKINRQVT FSKRRGGLVK KAHEISVLCD AEVALIVFSH KGKLFEYSTD 60 SCMDKILEKY ERYSFAERQL IATEPQPPAN WNLEYSKLKA RIDLLQRNQR HYMGEDLDSM 120 SLKDLQNLEQ QLDIALKSIR SRKNQLLYDS ISELQQKERA IQEQNSMLTK QIKEKEQEMV 180 HQPQWEHQNH GHNTPPPPPP PFLMAPQLPC LNIGGGYQGE AMEGRRNNEL DLTLDSLYSC 240 HLGCFAAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-115 | MIKC_MADS family protein |