PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15971.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family AP2
Protein Properties Length: 346aa    MW: 39137.4 Da    PI: 6.5185
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15971.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.33.4e-1244100155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  ++n  ++k+ + g ++ +e Aa a++ a++k++g
  PIN15971.1  44 SIYRGVTRHRWTGRYEAHLWDkNCWNEaQNKKGRQGAYDDEEAAAHAYDLAALKYWG 100
                 57*******************99999999988888********************98 PP

2AP252.31.4e-16143194155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  PIN15971.1 143 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAIAYDMAAIEYRG 194
                 89****99**********99966...3.6*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MAKLSQQNSK NYPNVNANPV NNPGMKAKRT RKTIPRDSPP QRSSIYRGVT RHRWTGRYEA  60
HLWDKNCWNE AQNKKGRQGA YDDEEAAAHA YDLAALKYWG QDTILNFPLS TYEKELTEME  120
GQSREEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE  180
AAIAYDMAAI EYRGLNAVTN FDLSRYIKWL RPNSNNPNKP NDVDTNLDPS PNHDSGSSAS  240
LHQLEPPSAS LSQPRPATAT SALGLLLQSS KFKEMMEMTL AAECPSTPQE SDPPQSSIPE  300
DIKTCFESND FCAYNDQGDD IFEQLNSYME PMVQFDSMLN GEDLVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.11e-105AP2 family protein