![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIN15162.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 589aa MW: 64970.6 Da PI: 6.7364 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.5 | 2.5e-11 | 208 | 264 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g PIN15162.1 208 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 264 57*******************5444.2455536655.779999**************98 PP | |||||||
2 | AP2 | 47 | 6.6e-15 | 309 | 358 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PIN15162.1 309 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 358 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 589 aa Download sequence |
MNSNNWLSFP LSPTHPSLPP HLQTPQSHHF SLGLVSDNIE TPFQNQGKYL YIHTHISLSF 60 FPYMTIFLLK FTPFYLINFV AYPEWNLINN QESNEVPKVA DFLGVSKSDS QSELVSYNEI 120 QSSDSDYLFS SNSLVPVQHT LAAAAATNYE NLQENSCNMQ QLTLSMGSGK GSTSETSASA 180 TPSADNSNTS IVEAAPRRTL DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS CRREGQSRKG 240 RQGGYDKEEK AARAYDLAAL KYWGTSTTTN FPISNYEKEL EEMKHMTRQE FVASIRRKSS 300 GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TEEEAAEAYD IAAIKFRGLN 360 AVTNFDMSRY DVKAILESNT LPIGGGAAKR LKEAQAIESS RKREEMISLG STFQYGGTSG 420 GPLQAYPLMQ HPFDTHQPLL TLQNQDLSQY NQDSSSHYQS YIQTQLQLHQ QPCSYNINNS 480 TGGSTQFYGN YLNNNPVLLH GLMNMGSSSS VMDNNGSSSG TYSGGFLGNG LGMGSGSGSG 540 SGNGGSGSAE ELAMVKVDYD HMPSAGTYTG WSGETVQGSN PGVFTMWND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G51190.1 | 0.0 | AP2 family protein |