PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15162.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family AP2
Protein Properties Length: 589aa    MW: 64970.6 Da    PI: 6.7364
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15162.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.52.5e-11208264155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  +     ++ k  + g ++ +e+Aa+a++ a++k++g
  PIN15162.1 208 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 264
                 57*******************5444.2455536655.779999**************98 PP

2AP2476.6e-15309358355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  PIN15162.1 309 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 358
                 9***************988532...5************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 589 aa     Download sequence    
MNSNNWLSFP LSPTHPSLPP HLQTPQSHHF SLGLVSDNIE TPFQNQGKYL YIHTHISLSF  60
FPYMTIFLLK FTPFYLINFV AYPEWNLINN QESNEVPKVA DFLGVSKSDS QSELVSYNEI  120
QSSDSDYLFS SNSLVPVQHT LAAAAATNYE NLQENSCNMQ QLTLSMGSGK GSTSETSASA  180
TPSADNSNTS IVEAAPRRTL DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS CRREGQSRKG  240
RQGGYDKEEK AARAYDLAAL KYWGTSTTTN FPISNYEKEL EEMKHMTRQE FVASIRRKSS  300
GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TEEEAAEAYD IAAIKFRGLN  360
AVTNFDMSRY DVKAILESNT LPIGGGAAKR LKEAQAIESS RKREEMISLG STFQYGGTSG  420
GPLQAYPLMQ HPFDTHQPLL TLQNQDLSQY NQDSSSHYQS YIQTQLQLHQ QPCSYNINNS  480
TGGSTQFYGN YLNNNPVLLH GLMNMGSSSS VMDNNGSSSG TYSGGFLGNG LGMGSGSGSG  540
SGNGGSGSAE ELAMVKVDYD HMPSAGTYTG WSGETVQGSN PGVFTMWND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.10.0AP2 family protein