PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11502.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 244aa    MW: 27729.6 Da    PI: 9.4894
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.41.4e-31959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  PIN11502.1  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCS 59
                79***********************************************96 PP

2K-box92.67e-31881731398
       K-box  13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                  + ++qqe+ kLk+++e Lqr+qR+llGedL++L+ keL++Le+qL+ slk+iRs++++ +++ + +lq+ke++l+e+nk+L+++l
  PIN11502.1  88 LELRSQQEYLKLKARYEALQRTQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQAMVDTLTDLQRKEHALSEANKSLKQRL 173
                 45679******************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFST RGKLYEFCSS  60
SSMLKTLERY QKCNYGAPEP NVSTREALEL RSQQEYLKLK ARYEALQRTQ RNLLGEDLGP  120
LNSKELESLE RQLDMSLKQI RSTRTQAMVD TLTDLQRKEH ALSEANKSLK QRLIEGSQIS  180
FQWNPSAQGH VVGYGRHPNQ PQPDGFFHPL ESCEPTLQIG YQTDPIAVAA AGPSVNNYMS  240
GWLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.11e-125MIKC_MADS family protein