PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11433.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 258aa    MW: 29620.8 Da    PI: 9.1404
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF983.7e-31958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g++yey+
  PIN11433.1  9 KRIENNTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRVYEYA 58
                79***********************************************8 PP

2K-box104.41.4e-34811738100
       K-box   8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                  ++e +a+ +qqe++kL+++i++Lq+++Rhl+Ge+L+sL++keL+qLe++Le+++++iR kK+e++l+++e lqk+e +l++en +Lr+k++e
  PIN11433.1  81 TTQEINAQFYQQESKKLRQQIQMLQNSNRHLMGEGLGSLNVKELKQLESRLERGITRIRGKKHEMILAETESLQKREIQLEQENACLRAKIQE 173
                 378999************************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MGRGKIEIKR IENNTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRVYEYANN  60
NIRSTIERYK RATADSSNAY TTQEINAQFY QQESKKLRQQ IQMLQNSNRH LMGEGLGSLN  120
VKELKQLESR LERGITRIRG KKHEMILAET ESLQKREIQL EQENACLRAK IQENEKLQQL  180
SMMPSGQDFA FQAYLARNVL QLNMMDNVSA YPVSDKKTLH LGIFMECSHN SSSAELIVGV  240
ISLSEDSCIS EVDQFRIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.11e-100MIKC_MADS family protein