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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN11433.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 258aa MW: 29620.8 Da PI: 9.1404 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98 | 3.7e-31 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g++yey+ PIN11433.1 9 KRIENNTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRVYEYA 58 79***********************************************8 PP | |||||||
2 | K-box | 104.4 | 1.4e-34 | 81 | 173 | 8 | 100 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++e +a+ +qqe++kL+++i++Lq+++Rhl+Ge+L+sL++keL+qLe++Le+++++iR kK+e++l+++e lqk+e +l++en +Lr+k++e PIN11433.1 81 TTQEINAQFYQQESKKLRQQIQMLQNSNRHLMGEGLGSLNVKELKQLESRLERGITRIRGKKHEMILAETESLQKREIQLEQENACLRAKIQE 173 378999************************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MGRGKIEIKR IENNTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRVYEYANN 60 NIRSTIERYK RATADSSNAY TTQEINAQFY QQESKKLRQQ IQMLQNSNRH LMGEGLGSLN 120 VKELKQLESR LERGITRIRG KKHEMILAET ESLQKREIQL EQENACLRAK IQENEKLQQL 180 SMMPSGQDFA FQAYLARNVL QLNMMDNVSA YPVSDKKTLH LGIFMECSHN SSSAELIVGV 240 ISLSEDSCIS EVDQFRIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.1 | 1e-100 | MIKC_MADS family protein |