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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN07703.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 231aa MW: 26436.2 Da PI: 9.6556 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.6 | 6.9e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri+n++ rqvtfskRr g+lKKA+EL +LCdaev viifsstg+l+e+s+ PIN07703.1 9 KRIDNSTSRQVTFSKRRSGLLKKAKELAILCDAEVGVIIFSSTGRLHEFSN 59 79***********************************************95 PP | |||||||
2 | K-box | 76.7 | 6.2e-26 | 80 | 171 | 8 | 99 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ +++ + +q+e+a+L++++ +Lq+++R+l+Ge+L + +++L Le+qLe sl+ +R kK+++l+e+i+el +k ++e+n +L kk++ PIN07703.1 80 RNPASEIKFWQREAANLRQQLLELQENHRKLMGEELYGMIVNDLDGLETQLEASLRGVRLKKEKMLTEEIQELSRKGSYVHEQNVELYKKVK 171 3678899**********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MGRGKIAIKR IDNSTSRQVT FSKRRSGLLK KAKELAILCD AEVGVIIFSS TGRLHEFSNT 60 SMKSIIERYN KTKEEQDQLR NPASEIKFWQ REAANLRQQL LELQENHRKL MGEELYGMIV 120 NDLDGLETQL EASLRGVRLK KEKMLTEEIQ ELSRKGSYVH EQNVELYKKV KLIEQENMEL 180 YRKAYGARNA SSVNGAGFAP YSRELHGPIM LHLSPPAAES LETPERATES R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 9e-98 | MIKC_MADS family protein |