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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN06593.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 191aa MW: 22492.3 Da PI: 10.5923 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 80.2 | 1.4e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie s rqvtfsk r+ +lKKA+ELSvLCdaeva+iifs +g+lye+ss PIN06593.1 9 KRIEKASSRQVTFSKTRKRLLKKAYELSVLCDAEVALIIFSRKGRLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 61.3 | 3.9e-21 | 82 | 169 | 10 | 98 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 e+++++ ++++a + ++ie L+++ +lG +L+++s++eLq+ +qL +slk+iRs+K +l++ ie+lq kek+l+een++Lr+k+ PIN06593.1 82 VEQHMQHVKHKAAMMSRKIEILENS-YGFLGHNLGTCSIEELQSTGEQLGRSLKNIRSRKAQLFKGDIEKLQAKEKSLSEENERLREKV 169 5889*******************99.9***********************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MVRGKVEMKR IEKASSRQVT FSKTRKRLLK KAYELSVLCD AEVALIIFSR KGRLYEFSSP 60 NIQRSIQKYL ELTKERHVGM EVEQHMQHVK HKAAMMSRKI EILENSYGFL GHNLGTCSIE 120 ELQSTGEQLG RSLKNIRSRK AQLFKGDIEK LQAKEKSLSE ENERLREKVR FLIISFQKFL 180 TMEWIYIQIR P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-63 | MIKC_MADS family protein |