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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN06533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 219aa MW: 25026.6 Da PI: 9.6813 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95 | 3.3e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s PIN06533.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 82.6 | 8.7e-28 | 79 | 171 | 7 | 98 |
K-box 7 ks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ e+++++l++e+a + k+ie+L+ ++R+llGe+L+ +s++eLqqLeqqLe+s+++iR++K++++++qie+l++k k+l en +L +k+ PIN06533.1 79 NNpPPEHNMQHLKHEAASMMKKIEQLEASKRKLLGEGLSACSIEELQQLEQQLERSVNNIRARKMQVYKQQIEQLKEKGKALAAENAMLCEKF 171 33478999*********************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 SMHETIERYQ KHTKEMQANN PPPEHNMQHL KHEAASMMKK IEQLEASKRK LLGEGLSACS 120 IEELQQLEQQ LERSVNNIRA RKMQVYKQQI EQLKEKGKAL AAENAMLCEK FGQQNQQGGS 180 SEERALAPQP SAEISEVSDV ETELFIGPPE TRNKRPFQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 7e-90 | MIKC_MADS family protein |