PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06533.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 219aa    MW: 25026.6 Da    PI: 9.6813
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF953.3e-301059251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  PIN06533.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59
                8***********************************************86 PP

2K-box82.68.7e-2879171798
       K-box   7 ks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                 ++   e+++++l++e+a + k+ie+L+ ++R+llGe+L+ +s++eLqqLeqqLe+s+++iR++K++++++qie+l++k k+l  en +L +k+
  PIN06533.1  79 NNpPPEHNMQHLKHEAASMMKKIEQLEASKRKLLGEGLSACSIEELQQLEQQLERSVNNIRARKMQVYKQQIEQLKEKGKALAAENAMLCEKF 171
                 33478999*********************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS  60
SMHETIERYQ KHTKEMQANN PPPEHNMQHL KHEAASMMKK IEQLEASKRK LLGEGLSACS  120
IEELQQLEQQ LERSVNNIRA RKMQVYKQQI EQLKEKGKAL AAENAMLCEK FGQQNQQGGS  180
SEERALAPQP SAEISEVSDV ETELFIGPPE TRNKRPFQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.17e-90MIKC_MADS family protein