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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN05942.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 135aa MW: 15318.8 Da PI: 9.0059 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 82.2 | 3.2e-26 | 9 | 54 | 1 | 46 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkl 46 +rien s rqv fskRrng+lKKA+E+SvLCdaeva+iifs++g+l PIN05942.1 9 ERIENASSRQVAFSKRRNGLLKKAYEVSVLCDAEVALIIFSEKGRL 54 69******************************************98 PP | |||||||
2 | K-box | 42.5 | 2.8e-15 | 55 | 104 | 35 | 84 |
K-box 35 qRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 q +llG +L ++s++eLq++ +qLe+sl+++Rs K +l++e+ie+lq+k PIN05942.1 55 QLQLLGHNLFTCSMEELQNIGEQLERSLENVRSIKVQLFKEEIEKLQRKL 104 679*********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MVRGKVEMER IENASSRQVA FSKRRNGLLK KAYEVSVLCD AEVALIIFSE KGRLQLQLLG 60 HNLFTCSMEE LQNIGEQLER SLENVRSIKV QLFKEEIEKL QRKLTAGIGS CSRSTECSEV 120 VTELFIGSPT RRKLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 8e-37 | MIKC_MADS family protein |