PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05867.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

AP2

Protein Properties

Length: 481aa MW: 52907.2 Da PI: 6.5576

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.8	8.6e-11	203	259	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + rk + g ++ +++Aa+a++ a++k++g PIN05867.1 203 SIYRGVTRHRWTGRYEAHLWDnSCR-RegqARKGRQ-GGYDKEDKAARAYDLAALKYWG 259 57*****************4444.2344336655.7799999***********98 PP
2	AP2	40.5	6.9e-13	303	358	2	55
AP2 2 gykGV.....rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV ++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PIN05867.1 303 IYRGVtrtnsCRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 358 699998888889999*****988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MAPDNNWLSF SLEMPPDSHH FYSFADNFYA NGWSNQKAMY AEAENHHLKE QNEAAVFTSY 60 MQPPPKLEDF FSSGGGDSTE TQDSSLTHIY DQHGGGGAAY FSNGDHQDLK TFTGFQAFSA 120 NSGSEVDDSA FAGQTQSPVE SAAAYSQGPM TANTATNALS LGVNNSNNST TTLCAENNNN 180 NSTAIVESES CKKIADTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QARKGRQGGY 240 DKEDKAARAY DLAALKYWGP TATTNFPISN YTKELEEMKH VTKQEFIASL RRKSSGFSRG 300 ASIYRGVTRT NSCRHHQQGR WQARIGRVAG NKDLYLGTFA TEEEAAEAYD IAAIKFRGVN 360 AVTNFEMSRY DVEAIAKSPL PIGGTAKRLK LSLEADEKLP LNTALQTPCS SNSSSSISFS 420 SIPPVSTIPC GVPFDTTAPF YHHSLFHHLA PDTPGAVSTM VTPMNLMPSP PEFFIWPHQS 480 Y

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MAPDNNWLSF SLEMPPDSHH FYSFADNFYA NGWSNQKAMY AEAENHHLKE QNEAAVFTSY  60
MQPPPKLEDF FSSGGGDSTE TQDSSLTHIY DQHGGGGAAY FSNGDHQDLK TFTGFQAFSA  120
NSGSEVDDSA FAGQTQSPVE SAAAYSQGPM TANTATNALS LGVNNSNNST TTLCAENNNN  180
NSTAIVESES CKKIADTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QARKGRQGGY  240
DKEDKAARAY DLAALKYWGP TATTNFPISN YTKELEEMKH VTKQEFIASL RRKSSGFSRG  300
ASIYRGVTRT NSCRHHQQGR WQARIGRVAG NKDLYLGTFA TEEEAAEAYD IAAIKFRGVN  360
AVTNFEMSRY DVEAIAKSPL PIGGTAKRLK LSLEADEKLP LNTALQTPCS SNSSSSISFS  420
SIPPVSTIPC GVPFDTTAPF YHHSLFHHLA PDTPGAVSTM VTPMNLMPSP PEFFIWPHQS  480
Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	1e-151	AP2 family protein