PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05086.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family AP2
Protein Properties Length: 472aa    MW: 52383.1 Da    PI: 6.61
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-17140189155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  PIN05086.1 140 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 189
                 78*******************......55************************998 PP

2AP242.12.1e-13232282155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ k +g
  PIN05086.1 232 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIKCNG 282
                 89********.7******5553..2.26**********99**********99776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MLSLNLAIDP SAPTTDRPET ALDKHLVLAG DQMEYSGSSN SSIVNVETSS TAGDENSCSN  60
NFVEFDIWKS SGECEESEKS SCGYVMKEFF PACSEAQASQ WLDRSENRNQ LAEQRIIAQQ  120
LQQRRQQVKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY  180
DRAAIKFRGL DADINFNVSD YEEDLKQMKN LTKEEFVHIL RRQSTGFSRG SSKYRGVTLH  240
KCGRWEARMG QFLGKKYIYL GLFDSEIEAA RAYDKAAIKC NGREAVTNFE PSTYEEELSS  300
EAEIGVSLGG EHHDLDLNLG IALPHRANGQ TQNMEMGGFQ IHCGSNNLPE NGAKGSASLF  360
IRAQLPHGHG NVPEQPFIWT GVDSSLRPVC EGTTIEKVMG VDSSANWTWK SPEDIHGDHP  420
SSPFATAASS GFATSSFTSP PAAIHQLPFS KSQNHYLPPV ANLNIGSHYC LR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-110AP2 family protein