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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN05086.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | AP2 | ||||||||
Protein Properties | Length: 472aa MW: 52383.1 Da PI: 6.61 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.3 | 3.3e-17 | 140 | 189 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PIN05086.1 140 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 189 78*******************......55************************998 PP | |||||||
2 | AP2 | 42.1 | 2.1e-13 | 232 | 282 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g PIN05086.1 232 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIKCNG 282 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence |
MLSLNLAIDP SAPTTDRPET ALDKHLVLAG DQMEYSGSSN SSIVNVETSS TAGDENSCSN 60 NFVEFDIWKS SGECEESEKS SCGYVMKEFF PACSEAQASQ WLDRSENRNQ LAEQRIIAQQ 120 LQQRRQQVKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY 180 DRAAIKFRGL DADINFNVSD YEEDLKQMKN LTKEEFVHIL RRQSTGFSRG SSKYRGVTLH 240 KCGRWEARMG QFLGKKYIYL GLFDSEIEAA RAYDKAAIKC NGREAVTNFE PSTYEEELSS 300 EAEIGVSLGG EHHDLDLNLG IALPHRANGQ TQNMEMGGFQ IHCGSNNLPE NGAKGSASLF 360 IRAQLPHGHG NVPEQPFIWT GVDSSLRPVC EGTTIEKVMG VDSSANWTWK SPEDIHGDHP 420 SSPFATAASS GFATSSFTSP PAAIHQLPFS KSQNHYLPPV ANLNIGSHYC LR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-110 | AP2 family protein |