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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN03685.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 212aa MW: 24822.5 Da PI: 9.7366 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.6 | 2.1e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien s rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++g+lye+ss PIN03685.1 9 KRIENVSSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSQKGRLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 72.1 | 1.7e-24 | 78 | 170 | 7 | 98 |
K-box 7 ks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +s e+++++l+ e+a + ++ie L+++qR+llG +L+++sl+eLq + +qLe+slk+iRs+K +l++e +e+ q kek l een++Lr+k+ PIN03685.1 78 TSiELEQHMQHLKYEAALMSRKIELLENSQRKLLGHNLGTCSLEELQDIDKQLERSLKNIRSRKAQLFKEDVEKFQTKEKFLLEENERLREKI 170 33467899***********************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MVRGKVEMKR IENVSSRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSQ KGRLYEFSSY 60 NMQKSIQKYL ERTKEQRTSI ELEQHMQHLK YEAALMSRKI ELLENSQRKL LGHNLGTCSL 120 EELQDIDKQL ERSLKNIRSR KAQLFKEDVE KFQTKEKFLL EENERLREKI GLKQRHEHEK 180 VQQEIGSCSR STLCSEVGTE LFIGPPTTGN LS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 5e-78 | MIKC_MADS family protein |