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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN03147.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 337aa MW: 39155.9 Da PI: 9.1667 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.7 | 4.9e-31 | 98 | 148 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+ PIN03147.1 98 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYST 148 79***********************************************96 PP | |||||||
2 | K-box | 103.5 | 2.7e-34 | 173 | 263 | 10 | 100 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 e + +++ e++kLk++i+ Lqr++R+++GedLes+s k+Lq+LeqqL+++lk+iR++Kn+ll+++i elq+kek++qe+n++L kk+ e PIN03147.1 173 EPQSPANWPLEYSKLKARIKLLQRNHRQYMGEDLESMSQKDLQNLEQQLDTALKNIRTRKNQLLYDSICELQRKEKAIQEQNNMLAKKIRE 263 55667899********************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence |
MWLLRDAGSR LDAVRKREIN CQLIRDCPMG AYLWVKKMGL LEGSSSSLQS TWQIQPGSNV 60 QYQPQPVQSD IFFAPLEPNN TPQIRKKEKM GRGKVQLKRI ENKINRQVTF SKRRAGLLKK 120 AHEISVLCDA EVALIVFSHK GKLFEYSTDS CMDRILEKYE RYSFAERQFV ANEPQSPANW 180 PLEYSKLKAR IKLLQRNHRQ YMGEDLESMS QKDLQNLEQQ LDTALKNIRT RKNQLLYDSI 240 CELQRKEKAI QEQNNMLAKK IREREKELEQ QAQWEQQNHC NNAHHLQSLP PPPLLMAPQL 300 PTLNIGGTYE ETAEARRNEL DLTLDSLYSC HLGCFAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-109 | MIKC_MADS family protein |