PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03147.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 337aa    MW: 39155.9 Da    PI: 9.1667
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.74.9e-3198148151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+
  PIN03147.1  98 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYST 148
                 79***********************************************96 PP

2K-box103.52.7e-3417326310100
       K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                 e +  +++  e++kLk++i+ Lqr++R+++GedLes+s k+Lq+LeqqL+++lk+iR++Kn+ll+++i elq+kek++qe+n++L kk+ e
  PIN03147.1 173 EPQSPANWPLEYSKLKARIKLLQRNHRQYMGEDLESMSQKDLQNLEQQLDTALKNIRTRKNQLLYDSICELQRKEKAIQEQNNMLAKKIRE 263
                 55667899********************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MWLLRDAGSR LDAVRKREIN CQLIRDCPMG AYLWVKKMGL LEGSSSSLQS TWQIQPGSNV  60
QYQPQPVQSD IFFAPLEPNN TPQIRKKEKM GRGKVQLKRI ENKINRQVTF SKRRAGLLKK  120
AHEISVLCDA EVALIVFSHK GKLFEYSTDS CMDRILEKYE RYSFAERQFV ANEPQSPANW  180
PLEYSKLKAR IKLLQRNHRQ YMGEDLESMS QKDLQNLEQQ LDTALKNIRT RKNQLLYDSI  240
CELQRKEKAI QEQNNMLAKK IREREKELEQ QAQWEQQNHC NNAHHLQSLP PPPLLMAPQL  300
PTLNIGGTYE ETAEARRNEL DLTLDSLYSC HLGCFAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.11e-109MIKC_MADS family protein