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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN01410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 186aa MW: 21983.5 Da PI: 9.8106 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.5 | 9.6e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie s rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++g+lye+ss PIN01410.1 9 KRIEKASSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSQKGRLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 76.1 | 9.1e-26 | 82 | 171 | 10 | 99 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e+++++l++e+a + ++ie L++++R++lG +L+++s++eLq++ +qLe+slk+iRs+K +l+ e++e+lq kek+l een++Lr+k++ PIN01410.1 82 VEQHMQHLKHEAAMMSRKIELLENSHRKFLGHNLGTCSMEELQNIGEQLERSLKNIRSRKAQLFEEETEKLQTKEKSLLEENERLREKVK 171 5889***********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MVRGKVEMKR IEKASSRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSQ KGRLYEFSSS 60 NIQRSIQKYL ELTEERHVGM EVEQHMQHLK HEAAMMSRKI ELLENSHRKF LGHNLGTCSM 120 EELQNIGEQL ERSLKNIRSR KAQLFEEETE KLQTKEKSLL EENERLREKV KFFIISLLKI 180 LNYVEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-66 | MIKC_MADS family protein |