PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01410.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 186aa    MW: 21983.5 Da    PI: 9.8106
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.59.6e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krie  s rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++g+lye+ss
  PIN01410.1  9 KRIEKASSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSQKGRLYEFSS 59
                79***********************************************96 PP

2K-box76.19.1e-26821711099
       K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                  e+++++l++e+a + ++ie L++++R++lG +L+++s++eLq++ +qLe+slk+iRs+K +l+ e++e+lq kek+l een++Lr+k++
  PIN01410.1  82 VEQHMQHLKHEAAMMSRKIELLENSHRKFLGHNLGTCSMEELQNIGEQLERSLKNIRSRKAQLFEEETEKLQTKEKSLLEENERLREKVK 171
                 5889***********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MVRGKVEMKR IEKASSRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSQ KGRLYEFSSS  60
NIQRSIQKYL ELTEERHVGM EVEQHMQHLK HEAAMMSRKI ELLENSHRKF LGHNLGTCSM  120
EELQNIGEQL ERSLKNIRSR KAQLFEEETE KLQTKEKSLL EENERLREKV KFFIISLLKI  180
LNYVEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-66MIKC_MADS family protein