PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01359.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family AP2
Protein Properties Length: 424aa    MW: 46609.3 Da    PI: 6.9964
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01359.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.91.8e-11158214155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  +       rk  + g ++ +e+Aa+a++ a++k++g
  PIN01359.1 158 SIYRGVTRHRWTGRYEAHLWDnSCR-RegqARKGRQ-GGYDKEEKAARAYDLAALKYWG 214
                 57*******************4444.2344336655.779999**************98 PP

2AP250.26.6e-16257308155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  PIN01359.1 257 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 308
                 57****************988532...5************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MYTEAQNNHL KELNPSIFSS FMHPQPPPKL EDFFSGGGDS TETQDSSLTH IYDHQNHAGS  60
SVYFSNGEQQ DLKTFSGFQT FSANSGSEVD DSAFAGQTQS PGESGSELVV YSQCPITATA  120
NTNALSLGVD ANENNKAIVS ADSVSCKKIA DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS  180
CRREGQARKG RQGGYDKEEK AARAYDLAAL KYWGPSATTN FPISNYTKEI EEMKHVTKQE  240
FIASLRRKSS GFSRGASIYR GVTRHHQQGR WQARIGRVAG NKDLYLGTFA TEEEAAEAYD  300
IAAIKFRGVN AVTNFEMSRY DVEAIAKSSL PIGGTAKRLK LSLEAEEKKL PLSTTLQTPS  360
SSNSSTSISF AAIQPTSTIP CGVPFDNSSP FYHHNLFICS NPGPSDTSTT VSPGEFFIWP  420
HQSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10510.21e-143AP2 family protein