![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIN01359.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 424aa MW: 46609.3 Da PI: 6.9964 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.9 | 1.8e-11 | 158 | 214 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + rk + g ++ +e+Aa+a++ a++k++g PIN01359.1 158 SIYRGVTRHRWTGRYEAHLWDnSCR-RegqARKGRQ-GGYDKEEKAARAYDLAALKYWG 214 57*******************4444.2344336655.779999**************98 PP | |||||||
2 | AP2 | 50.2 | 6.6e-16 | 257 | 308 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PIN01359.1 257 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 308 57****************988532...5************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 424 aa Download sequence |
MYTEAQNNHL KELNPSIFSS FMHPQPPPKL EDFFSGGGDS TETQDSSLTH IYDHQNHAGS 60 SVYFSNGEQQ DLKTFSGFQT FSANSGSEVD DSAFAGQTQS PGESGSELVV YSQCPITATA 120 NTNALSLGVD ANENNKAIVS ADSVSCKKIA DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS 180 CRREGQARKG RQGGYDKEEK AARAYDLAAL KYWGPSATTN FPISNYTKEI EEMKHVTKQE 240 FIASLRRKSS GFSRGASIYR GVTRHHQQGR WQARIGRVAG NKDLYLGTFA TEEEAAEAYD 300 IAAIKFRGVN AVTNFEMSRY DVEAIAKSSL PIGGTAKRLK LSLEAEEKKL PLSTTLQTPS 360 SSNSSTSISF AAIQPTSTIP CGVPFDNSSP FYHHNLFICS NPGPSDTSTT VSPGEFFIWP 420 HQSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G10510.2 | 1e-143 | AP2 family protein |