PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 212aa    MW: 24455.2 Da    PI: 10.0349
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.38.6e-28959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien s rqvtfskR+ng+ KKA ELSvLCdaeva+iifs++g+l+e+ss
  PIN01002.1  9 KRIENASSRQVTFSKRKNGLQKKACELSVLCDAEVALIIFSQKGTLFEFSS 59
                79***********************************************96 PP

2K-box72.31.5e-2481169997
       K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                 + e+++++l++e+a + ++ie L+++ R+llG +L+++s++eLq + +qL++slk+iRs+K++l++e i++lq kek l eenk+Lr+k
  PIN01002.1  81 AVEQHMQHLKHEAAMMSRKIELLENSRRKLLGHNLGTCSMEELQDIDKQLQRSLKNIRSRKDQLFKEDIQKLQTKEKFLLEENKRLREK 169
                 67999**********************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MVRGKVEMKR IENASSRQVT FSKRKNGLQK KACELSVLCD AEVALIIFSQ KGTLFEFSSS  60
DMQKSIQKYL ELTKDRHTSI AVEQHMQHLK HEAAMMSRKI ELLENSRRKL LGHNLGTCSM  120
EELQDIDKQL QRSLKNIRSR KDQLFKEDIQ KLQTKEKFLL EENKRLREKN GPKQRHVLDK  180
EQEEIGSGSL STQCSDVGIE LCIGPPTTRK LS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.15e-76MIKC_MADS family protein