![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIN00906.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 364aa MW: 41458.1 Da PI: 9.2176 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.6 | 2.4e-11 | 70 | 126 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+k + g ++ +e Aa+a++ a+ k++g PIN00906.1 70 SRFRGVSRHRWTGRFEAHLWDkGSWNAtqKKKGKQ-GAYDEEEAAARAYDLAAIKYWG 126 789******************99889994446666.*******************987 PP | |||||||
2 | AP2 | 51.7 | 2.2e-16 | 166 | 214 | 4 | 55 |
AP2 4 kGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +GV+ ++ +grW+A+I + g +k+ +lg++gt eeAa+a++ a+ +++g PIN00906.1 166 RGVSKHHHNGRWEARIGRvF---G-NKYLYLGTYGTQEEAAQAYDIAAIEYRG 214 8**************99966...3.6*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 364 aa Download sequence |
MDTYKKSEAS PEKRVISTVE QDAQQTKCVK RRRRSPSLVT LGYSTQQQPQ AFQIDQTAPT 60 TTTTTMKRSS RFRGVSRHRW TGRFEAHLWD KGSWNATQKK KGKQGAYDEE EAAARAYDLA 120 AIKYWGVSTY TNFPILDYEK EIEIMQNLTK EEYLASLRRR SSGFARGVSK HHHNGRWEAR 180 IGRVFGNKYL YLGTYGTQEE AAQAYDIAAI EYRGTNAVTN FDLSTYIRSL RPGQNSAGCR 240 NLTSSENDSN YMNLNKEPSS YFALTNPAIS QKHEIIERKM PLSPCKKATS TTALGLLLRS 300 SLFKELVEKT TTTAAEENDE KPIPCSGQED HEFVFYGEND HEKNASQLYN QTGQSFWNGM 360 QYEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G54320.3 | 1e-69 | AP2 family protein |