PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00906.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family AP2
Protein Properties Length: 364aa    MW: 41458.1 Da    PI: 9.2176
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.62.4e-1170126155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+++GV++++++gr++A+++d  s+n   k+k  + g ++ +e Aa+a++ a+ k++g
  PIN00906.1  70 SRFRGVSRHRWTGRFEAHLWDkGSWNAtqKKKGKQ-GAYDEEEAAARAYDLAAIKYWG 126
                 789******************99889994446666.*******************987 PP

2AP251.72.2e-16166214455
         AP2   4 kGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +GV+ ++ +grW+A+I   +   g +k+ +lg++gt eeAa+a++ a+ +++g
  PIN00906.1 166 RGVSKHHHNGRWEARIGRvF---G-NKYLYLGTYGTQEEAAQAYDIAAIEYRG 214
                 8**************99966...3.6*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MDTYKKSEAS PEKRVISTVE QDAQQTKCVK RRRRSPSLVT LGYSTQQQPQ AFQIDQTAPT  60
TTTTTMKRSS RFRGVSRHRW TGRFEAHLWD KGSWNATQKK KGKQGAYDEE EAAARAYDLA  120
AIKYWGVSTY TNFPILDYEK EIEIMQNLTK EEYLASLRRR SSGFARGVSK HHHNGRWEAR  180
IGRVFGNKYL YLGTYGTQEE AAQAYDIAAI EYRGTNAVTN FDLSTYIRSL RPGQNSAGCR  240
NLTSSENDSN YMNLNKEPSS YFALTNPAIS QKHEIIERKM PLSPCKKATS TTALGLLLRS  300
SLFKELVEKT TTTAAEENDE KPIPCSGQED HEFVFYGEND HEKNASQLYN QTGQSFWNGM  360
QYEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.31e-69AP2 family protein