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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN00687.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 156aa MW: 18253.2 Da PI: 9.9418 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.4 | 5e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+ELSvLCdaev++iifs++g+lye+ss PIN00687.1 9 KRIENAACRQVTFSKRRNGLLKKAYELSVLCDAEVSLIIFSQKGTLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 65.8 | 1.5e-22 | 82 | 155 | 10 | 83 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk 83 e+++++l++e+a + ++ie L+++ R+llG +L+++s +eLq++ +qLe+slk+iRs+K +l++e+ie+lq k PIN00687.1 82 VEQHMQHLKHEVAMMSRKIELLESSYRKLLGHNLGTCSWEELQNIGEQLERSLKNIRSRKAQLFKEEIEKLQAK 155 5789********************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MVRGKVQMKR IENAACRQVT FSKRRNGLLK KAYELSVLCD AEVSLIIFSQ KGTLYEFSSS 60 DMQKTIQKYL ERTKEQYAGI DVEQHMQHLK HEVAMMSRKI ELLESSYRKL LGHNLGTCSW 120 EELQNIGEQL ERSLKNIRSR KAQLFKEEIE KLQAKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 5e-71 | MIKC_MADS family protein |