PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00687.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 156aa    MW: 18253.2 Da    PI: 9.9418
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.45e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien   rqvtfskRrng+lKKA+ELSvLCdaev++iifs++g+lye+ss
  PIN00687.1  9 KRIENAACRQVTFSKRRNGLLKKAYELSVLCDAEVSLIIFSQKGTLYEFSS 59
                79***********************************************96 PP

2K-box65.81.5e-22821551083
       K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk 83 
                  e+++++l++e+a + ++ie L+++ R+llG +L+++s +eLq++ +qLe+slk+iRs+K +l++e+ie+lq k
  PIN00687.1  82 VEQHMQHLKHEVAMMSRKIELLESSYRKLLGHNLGTCSWEELQNIGEQLERSLKNIRSRKAQLFKEEIEKLQAK 155
                 5789********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MVRGKVQMKR IENAACRQVT FSKRRNGLLK KAYELSVLCD AEVSLIIFSQ KGTLYEFSSS  60
DMQKTIQKYL ERTKEQYAGI DVEQHMQHLK HEVAMMSRKI ELLESSYRKL LGHNLGTCSW  120
EELQNIGEQL ERSLKNIRSR KAQLFKEEIE KLQAKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.15e-71MIKC_MADS family protein