PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99666.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 223aa    MW: 26023.5 Da    PI: 9.293
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.95.4e-28959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+ rqvtfskRr g+lKKA+E+S+LCdaev +i+fs++gkl+e+s+
  PIM99666.1  9 KRIENKISRQVTFSKRRSGLLKKAQEISILCDAEVGLIVFSTKGKLFEFST 59
                79***********************************************96 PP

2K-box97.71.7e-3281171798
       K-box   7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                 + ++ +  e++++e+ kL ++ie Lqr++R++ GedL++Lsl+eLq+Leqq++++lk+iR++ n+l+  +i++lqkkek+l+e+n+ L k+l
  PIM99666.1  81 N-NDCERKENWCHEYPKLTARIELLQRNIRNYAGEDLDPLSLRELQNLEQQIDNALKRIRTRTNQLMNGSISQLQKKEKSLHEQNNLLAKQL 171
                 3.3445579*******************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MGRGRVQLKR IENKISRQVT FSKRRSGLLK KAQEISILCD AEVGLIVFST KGKLFEFSTD  60
SSMERIIEKY EEYAYSEKRA NNDCERKENW CHEYPKLTAR IELLQRNIRN YAGEDLDPLS  120
LRELQNLEQQ IDNALKRIRT RTNQLMNGSI SQLQKKEKSL HEQNNLLAKQ LLKENEKQQA  180
EESNKEEEEG LAKDASNFGL PKSPSELHRI PSLTIRYYFS LSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.15e-78MIKC_MADS family protein