PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98925.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family AP2
Protein Properties Length: 495aa    MW: 56162.9 Da    PI: 7.4195
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98925.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.3e-17146195155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  PIM98925.1 146 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 195
                 78*******************......55************************997 PP

2AP245.32.2e-14238288155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV+ +k  grW+A+   +     +k+++lg f+t+ eAaka+++a+ k +g
  PIM98925.1 238 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAAKAYDKAAIKCHG 288
                 89********.7******5553..2.26**********99***********9998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    
MWDLNDSPDQ RISDESEGCS DEKGKRVGSV SNSSSSAVVV EDGSEEEDAE RLGGRKRSSK  60
IFGFSVAGDD DSGPCSSPVT RQFFPVEDQD MMGSGGPPNF PRAHWVGVKF CQSEPHGGGS  120
SVFGKTAAEV AQPLKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH  180
AAARAYDRAA IKFRGVEADI NFSLEDYEED LKQMNNLTKE EFVHVLRRQS TGFPRGSSKY  240
RGVTLHKCGR WEARMGQFLG KKYVYLGLFD TEIEAAKAYD KAAIKCHGKE AVTNFDPSIY  300
EDELKPAESS NNPTDHNLDL SLGNSTSQRE QQHSFTTQFD MDWRRPERNR DGYNETETLE  360
LLSQTRLNSP KMNNEAYKFG QLRKTNEPHM LHQMFNRPLF GSQQNYQMMQ HQFAGGSMNR  420
EVDIEASVCR NEQQSQQQQH QQQQQQQQQW QQMNNQAQVQ LFASAAASSG FPQGQTLRPQ  480
NWLHKNGIHP LTRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-132AP2 family protein