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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM98925.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | AP2 | ||||||||
Protein Properties | Length: 495aa MW: 56162.9 Da PI: 7.4195 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.3e-17 | 146 | 195 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PIM98925.1 146 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 195 78*******************......55************************997 PP | |||||||
2 | AP2 | 45.3 | 2.2e-14 | 238 | 288 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAaka+++a+ k +g PIM98925.1 238 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAAKAYDKAAIKCHG 288 89********.7******5553..2.26**********99***********9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 495 aa Download sequence |
MWDLNDSPDQ RISDESEGCS DEKGKRVGSV SNSSSSAVVV EDGSEEEDAE RLGGRKRSSK 60 IFGFSVAGDD DSGPCSSPVT RQFFPVEDQD MMGSGGPPNF PRAHWVGVKF CQSEPHGGGS 120 SVFGKTAAEV AQPLKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH 180 AAARAYDRAA IKFRGVEADI NFSLEDYEED LKQMNNLTKE EFVHVLRRQS TGFPRGSSKY 240 RGVTLHKCGR WEARMGQFLG KKYVYLGLFD TEIEAAKAYD KAAIKCHGKE AVTNFDPSIY 300 EDELKPAESS NNPTDHNLDL SLGNSTSQRE QQHSFTTQFD MDWRRPERNR DGYNETETLE 360 LLSQTRLNSP KMNNEAYKFG QLRKTNEPHM LHQMFNRPLF GSQQNYQMMQ HQFAGGSMNR 420 EVDIEASVCR NEQQSQQQQH QQQQQQQQQW QQMNNQAQVQ LFASAAASSG FPQGQTLRPQ 480 NWLHKNGIHP LTRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-132 | AP2 family protein |