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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM98710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 214aa MW: 24657.4 Da PI: 10.1078 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.6 | 1e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++g+lye+ss PIM98710.1 9 KRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSQKGRLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 67.9 | 3.4e-23 | 82 | 170 | 9 | 97 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 e+++++l++e+a + k+ie L+++q +llG +L+ + lkeLq++ +qLe+slk+iR++K++l++e++e+l kek l een +L++k PIM98710.1 82 EVEQHMQHLRHEAAFMAKKIELLEKSQWKLLGHNLGACPLKELQEIDNQLERSLKNIRARKSQLFREEVEKLEAKEKFLLEENARLSEK 170 67899*********************************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MVRGKVQMKR IENATSRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSQ KGRLYEFSSS 60 NMPKTIERYL QHAKEERNTT IEVEQHMQHL RHEAAFMAKK IELLEKSQWK LLGHNLGACP 120 LKELQEIDNQ LERSLKNIRA RKSQLFREEV EKLEAKEKFL LEENARLSEK CCGLRGRNAQ 180 EKQKGIMGSH SLSTTSSEVV TELFIGPPTT RNAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-70 | MIKC_MADS family protein |