PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98710.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 214aa    MW: 24657.4 Da    PI: 10.1078
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98710.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.61e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++g+lye+ss
  PIM98710.1  9 KRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSQKGRLYEFSS 59
                79***********************************************96 PP

2K-box67.93.4e-2382170997
       K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                   e+++++l++e+a + k+ie L+++q +llG +L+ + lkeLq++ +qLe+slk+iR++K++l++e++e+l  kek l een +L++k
  PIM98710.1  82 EVEQHMQHLRHEAAFMAKKIELLEKSQWKLLGHNLGACPLKELQEIDNQLERSLKNIRARKSQLFREEVEKLEAKEKFLLEENARLSEK 170
                 67899*********************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MVRGKVQMKR IENATSRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSQ KGRLYEFSSS  60
NMPKTIERYL QHAKEERNTT IEVEQHMQHL RHEAAFMAKK IELLEKSQWK LLGHNLGACP  120
LKELQEIDNQ LERSLKNIRA RKSQLFREEV EKLEAKEKFL LEENARLSEK CCGLRGRNAQ  180
EKQKGIMGSH SLSTTSSEVV TELFIGPPTT RNAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-70MIKC_MADS family protein