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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM97343.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 197aa MW: 22517.4 Da PI: 8.9773 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 78.8 | 3.9e-25 | 9 | 56 | 1 | 48 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48 krien rqvtf+kRr+g+lKKA+ELSvLCdae+ + ifs +gklye PIM97343.1 9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYE 56 79*********************************************9 PP | |||||||
2 | K-box | 47.7 | 6.9e-17 | 73 | 159 | 14 | 100 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +e ++e++ Lk eie L + +R + + + ++l eL+ +e++Le + ++Rs K+++++++i+ l++ke lq +nk L++k++e PIM97343.1 73 TEDPKEEISMLKHEIEILHKGLRFISRGGAGAMTLDELNVIEKRLEIWIDHVRSAKMDIMVQEIQLLKNKEGILQAANKHLQQKVDE 159 677799******************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MARGKIQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGLFIFSA HGKLYEQATK 60 GKICEKSCRQ VITEDPKEEI SMLKHEIEIL HKGLRFISRG GAGAMTLDEL NVIEKRLEIW 120 IDHVRSAKMD IMVQEIQLLK NKEGILQAAN KHLQQKVDEQ YGMGELAPML TNNIQYPLTT 180 NIQTQCPLTI PSETYLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 5e-64 | MIKC_MADS family protein |