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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022775175.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 506aa MW: 56644.3 Da PI: 6.4641 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.4e-17 | 155 | 204 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022775175.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 204 78*******************......55************************997 PP | |||||||
2 | AP2 | 44.4 | 4.1e-14 | 247 | 297 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k++g XP_022775175.1 247 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDRAAIKFNG 297 89********.7******5553..2.26**********99***********9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 506 aa Download sequence |
MWDLNDSPDQ PRDDESEGCS SQKTSIDGDE EKGKRVGSVS NSSSSALVIE DGSEEEDGER 60 VKAALKKRSS KIFGFSVSHE EESMESDPGP VTRQFFPLDQ DPEMGATSGG GGAGFPRAHW 120 VGVKFCQSEP LATGKSVEVS QPTKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV 180 YLGGFDTAHA AARAYDRAAI KFRGVEADIN FSIEDYEEDL KQMSNLTKEE FVHVLRRQST 240 GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EIEAARAYDR AAIKFNGKDA 300 VTNFDPIIYD NELNSGETSG NAGDDNLDLS LGNSTPKQNN VDFVAQKQIA MSDQHNLIPE 360 ADWQYRGFRS KEPCRSDDAH HRRSDGYSEA ETMQLLSQTH IQSPALGKSD EMQRYGQLRR 420 PGENHMFHIF PPHVNPSTYQ IHFPSGSNGS RIESDLSLST SEYQQWQSGP HQFFANAAAS 480 SGFPSQIRPS QTWLQKNGFY SLMRPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-128 | AP2 family protein |