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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022772252.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 686aa MW: 75215.4 Da PI: 6.7937 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.9 | 4e-16 | 330 | 389 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022772252.1 330 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 389 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 45.6 | 1.8e-14 | 434 | 483 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022772252.1 434 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 483 9***************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 686 aa Download sequence |
MKSMNDNSNG INNNWLGFSL STHLKMEVAT GPQHRRHQYH HHSQDSAAVA AAATSVSNAI 60 PTSFYLSSHL NGSGICYGVG ESGGFHAPLP VMPLKSDGSL GIVESLSRSQ SEGIVPTSSP 120 KLEDFLGGAT METHQYESHE RETMALSLDS MYYHQNADQE TNRQHSLDHL QEPFRQQGQE 180 FPVHTHPYYS GLACQGMYQS PLEDETKDPQ LAVCDSQIPQ IGQDAMPCFK NWVARHYSTH 240 SSLEQQMTSS MVDDGAASGS VVAMGCGDLQ SLSLSMSPGS QSSCVTAPRQ ISSTATECVA 300 METKKRGPGK VGKNQPVHRK SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQSR 360 KGRQVYLGGY DMEEKAARAY DLAALKYWGP STHINFPLEN YREELEEMKN MSRQEYVAHL 420 RRKSSGFSRG ASMYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK 480 FRGVNAVTNF DITRYDVERI VASNTLLAGE LARRNKETDS NNEANDYNTP KLTNGETIQP 540 EVNNGDESDW KMVLCESPQQ QPVGAVEPLD QKSVSTANCG NPAFSMALQG LIGVGSVSSS 600 PPMVDESTNV GTHYSNPSSL VTSVSNSREG SPDKTGSTML FAKPSLASKF ISPTNGVSWF 660 PSAAAQLRPA AISMAHLPLF AAWSDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-149 | AP2 family protein |