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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022766436.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 684aa MW: 75470.9 Da PI: 6.9714 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.9 | 3.9e-16 | 329 | 388 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022766436.1 329 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 388 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 45.6 | 1.8e-14 | 433 | 482 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022766436.1 433 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 482 9***************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 684 aa Download sequence |
MKTMNDNSNG SNNHWLGFSL SPNMKMEVAT DPQHRHHQYP HHSQAASAAA PAVSCISNAV 60 PTSFYLPSHL NGTGICYGVG ETGGFHAPLS VMPLKSDGSL CIMEALSRSQ SEGIVPTSSP 120 KLEDFLGGAT METHQYGSHE REAMALSLDS MYYHQNANQE TNRHHSLELL QEPFRQQDQE 180 FDVQTHPYYS ALACQGMYQS PLEETKDAQL THCNSQIPQL GEETMPCFKN WATRQYSTHS 240 SLEQQMTNSM VDDGAASGSV GTMGCGDLQS LSLSMSPGSQ SSCVTAPRQI SPTATECVAM 300 ETKKRGTGKV GQKQPVHRKS IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK 360 GRQVYLGGYD MEEKAARAYD LAALKYWGPS THINFPLENY RDELEEMKNM SRQEYVAHLR 420 RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF 480 RGVNAVTNFD ITRYDVKRIM ASNTLLAGEL ARGKKETDSN NEANDYSTPI LTNEETQPDV 540 NNRNASDWKM ALYQSPQQQP SIGAVESLDQ KSVSTGNYRN PTFSMALQDL VVDSVSSSQP 600 LLDESTKLGT QYSNPSSLVT CVSDSREGSP DKTGSARLFA KPPLASKLIS PTNGVSCFPS 660 AAAELRPGAL SMAHLPLFAA WNDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-129 | AP2 family protein |