![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022766162.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 491aa MW: 54202.7 Da PI: 6.6492 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.2 | 7.2e-17 | 167 | 216 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d+ rk+++lg f+ta Aa+a+++a+ k++g XP_022766162.1 167 SQYRGVTFYRRTGRWESHIWDC-----RKQVYLGGFDTAHAAARAYDRAAIKFRG 216 78*******************5.....5************************997 PP | |||||||
2 | AP2 | 42 | 2.2e-13 | 259 | 309 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_022766162.1 259 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIKCNG 309 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 491 aa Download sequence |
MMLDLNLSTI LGGDDDSAVM AGENNPFDIS GYNNTNQMVS SGSYDSSIVN ADTTTTTGDD 60 DSCSNIAATD TFAYSFGILK TAQEEPENNR TTIPLFPASV EGNGGKSTGS SQKKWLDLGG 120 SQEASEHYHG GGGAAEQRIV TQQQYQQQAQ LRQQVKKSRR GPRSRSSQYR GVTFYRRTGR 180 WESHIWDCRK QVYLGGFDTA HAAARAYDRA AIKFRGVDAD INFNVSDYDD DIKQMSNFTK 240 EEFVHILRRQ STGFSRGSSK YRGVTLHKCG RWEARMGQFL GKKYIYLGLF DSEIEAARAY 300 DKAAIKCNGR EAVTNFEPST YEEESEKGDQ NQGLDLNLGI APPCTSDPQK ESDNSSNWDG 360 LPVERGARIE NSVLTTMSLQ PSLGQAMAFK HIPNWNGANS TFFPVYRERV IEKRIEVGSP 420 PSLAWQIQGP YSGTNPVPLF PTAASSGFSS SIITSSSAAT GQLHNPNTTF LHHHYPPVIT 480 NPNISHFYCR S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28550.3 | 6e-99 | AP2 family protein |