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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022765314.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 491aa MW: 54328.5 Da PI: 8.2571 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.2e-17 | 165 | 214 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022765314.1 165 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 214 78*******************......55************************997 PP | |||||||
2 | AP2 | 39.9 | 1e-12 | 257 | 307 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a++ a+ k +g XP_022765314.1 257 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDMAAMKCNG 307 89********.7******...5...334336**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 491 aa Download sequence |
MLDLNLDIVS SESSCDENNK MFDKLLPEAV TTLTQMEDSG STNSSIINAE DVPSNAGDEN 60 SSNNGSAFIF DILKKETDDT SMTINAKRVE NPSPDFVTRQ LFQFTGEKDC LELEFGSSAL 120 GTKSLARPRW LNLSYAESSG VAELKTVQLK PQSRKSRRGP RSRSSQYRGV TFYRRTGRWE 180 SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FNLSDYEEDM KQMKHMSKEE 240 FVHILRRQST GFSRGSSKYR GVTLHKCGRW EARMGQLLGK KYIYLGLFDS EVEAARAYDM 300 AAMKCNGREA VTNFEPSTYK GEITYSGGNC HNLDLSLGIS TPSVVQNRSN KGGDLHFRLA 360 ASAGERPMFE SSATTSVGVQ PQHYQTIASK QPPISSGVYP FLFPNNEERA MEKRAEAVSS 420 TRFSNWAWQM QGNGKIAPVP VFPIAASSGF SSSSATASSN TFLLNNSVQS VCFLTPPTAT 480 NSHSPYNSYR S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-101 | AP2 family protein |