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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022756545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 617aa MW: 67451.4 Da PI: 7.4935 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.6 | 8.7e-15 | 251 | 310 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022756545.1 251 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 310 57*******************666664477446*************************98 PP | |||||||
2 | AP2 | 46.9 | 6.8e-15 | 353 | 404 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022756545.1 353 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 404 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 617 aa Download sequence |
MRLLFLSLAT SISVSSSASL SSFHFLSHGF IDSLFLLLLL VVPLFPKTKN NSYLLLISLS 60 SFEIFVRQGD TMDMNMGSMD SSSSTQNWLA FSLSNHRQQQ HLNLPSSTSH LCLFEAFTTS 120 TTIATPATTN SSAAEEDAGA GAGTTVGATD LSMFNGGPKL EDFLGGSSTT TGAGAAPQQQ 180 LPHHHFATET PVTVSDTEIY DSELKTIAAS FLRGFSSEQT DTRKQRQQKQ QVPASEPAPR 240 RALDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQS RKGRQVYLGG YDKEEKAARA 300 YDLAALKYWG ATTTTNFPIS TYEKELEEMK NMTRQEFVAS LRRKSSGFSR GASIYRGVTR 360 HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGLNAVTN FDMSRYDVKS 420 IVNSNLPIGG LGNKTKNCSD SASDSKSTDD DRDHSSASSA VTFAAQPAPS STLSFAVPIK 480 QDPSDYWSSI FGYNNSTASL SSAKNPSLFH QPSNNGSGFQ SPTDFNMDFG GNSTVNESIN 540 NGLFNVGGYV QQQQQQQQQT STSSLPFATP IVLNNSVNNN YEGSSGYGSW NIAQSLQSYQ 600 TAKPSLSVFQ TPIFGME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-151 | AP2 family protein |