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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022754058.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 525aa MW: 58463.2 Da PI: 6.5696 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.1 | 5.9e-15 | 164 | 223 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022754058.1 164 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 223 57*******************666664477446*************************98 PP | |||||||
2 | AP2 | 47.2 | 5.6e-15 | 268 | 317 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022754058.1 268 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 317 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 525 aa Download sequence |
MNSNNWLPFP LSPPNSSLPT HLHSSQSHQF NLGLVNDNMG NPFQAQEWNL INTHDTSEVP 60 KVADFLGVSK SESPSLDLVA FNEIHQANDS EYSFQNNSIV QVQNTVVAAN NNYEFQENAN 120 NLQSLTLSMG SGRGSTSETS AENSTNIVEA PPRRTLDTFG QRTSIYRGVT RHRWTGRYEA 180 HLWDNSCRRE GQSRKGRQVY LGGYDKEEKA ARAYDLAALK YWGTSTTTNF PISNYEKELE 240 EMKHMTRQEF VAAIRRKSSG FSRGASMYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST 300 EEEAAEAYDI AAIKFRGLNA VTNFDMSRYD VKAILESNTL PIGGGAAKRL KEAQALESSR 360 KREEIMALGS SLQYGSSSSS RLQAYPLIQV PFEQSQPLLT LQNHDISEYT QDTSSFPQNY 420 IQTQLQLHQQ SGSYMHQSSQ NSQFYNSYIQ NNPALLHGLM NMGCSNSSSV VDNNGSPSGS 480 YSGVRCTEEL ALVKADYDMP SGGYGGWSGD SVQGSNPGVF SMWND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20840.1 | 0.0 | AP2 family protein |