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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022751256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 504aa MW: 56553.2 Da PI: 6.9997 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.4e-17 | 158 | 207 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022751256.1 158 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 207 78*******************......55************************997 PP | |||||||
2 | AP2 | 40.6 | 6.5e-13 | 250 | 297 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k XP_022751256.1 250 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDSEIEAARAYDRAAIK 297 89********.7******5553..2.26**********99*********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 504 aa Download sequence |
MEKMWDLNDS PDQPRDDESE GCSSQKTSND GDEDKGKRVG SVSNSSSSAV VIEDGSEEED 60 GERVQAALKK RRSKIFGFSV PYEEESMGSD PDPVTRQFFP LDQDPEMGAT SGGSGSGFPR 120 AHWVGVKFCQ SESLVPETTV EASQPMKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG 180 KQVYLGGFDT AHAAARAYDR AAIKFRGVEA DINFSIEDYE EDLKQMSNLT KEEFVHVLRR 240 QSTGFPRGSS KYRGVTLHKC GRWEARMGQF LGKKYVYLGL FDSEIEAARA YDRAAIKSNG 300 KDAVTNFDPS IYDNEFNSGG NAGGHNLDLS LGNSTSKQSN PEFGADRQNA VGDQHSLPPE 360 ADWRYRGFRP KLMNMQQKPC RSDDPHRRSD RYSEAETMQL LSQTHIQSPA SVKSNEMQRY 420 GQLRRPEENH MSGILPQHVN PSTYQIHFPS NSNGIRIGSD LSLSTSDRQW QPGPHQLFAN 480 TAASSGFPSQ IRPSQTWLQK NGFY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 69 | 74 | KKRRSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-127 | AP2 family protein |