![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022751177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 679aa MW: 75349.3 Da PI: 6.6793 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.9 | 3.9e-16 | 328 | 387 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022751177.1 328 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 387 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 45.6 | 1.7e-14 | 432 | 481 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022751177.1 432 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 481 9***************988532...5************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 679 aa Download sequence |
MKSMSNDDNN NSNNTTNWLG FSLSPLMKME VSNQDPHHQT QSASDAVAAG GGSGVTTAVP 60 SSFFQSPSHL NYGLYYGVEG QNGGLYSHFP VMPLKSDGSL CLMEALGRSQ PPAMVPTSTP 120 KLEDFFGGAA MGTHHYESSD REAMSLSLDS MYYHQNPDQE HNNQNCLDHL QHSSRQQHQQ 180 QLPVQQYQYY SGYSNHEMLL GEEAKETHVT DCNLQLPPMA DDRAPGVKHW VSRNYSTEHA 240 MNQKMIGCMG DNGAESGSIG AMAYGDLQSL SLSMSPGSQS SCVTGSQQIS PSATDYAAME 300 TKKRGPEKVD QKQIVHRKSI DTFGQRTSQY RGVTRHRWTG RYEAHLWDNS CKKEGQSRKG 360 RQVYLGGYDM EEKAARAYDL AALKYWGPST HINFPLEDYQ KELEEMKNMT RQEYVAHLRR 420 KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR 480 GVNAVTNFDI TRYDVERIMA SNTLLAGELA RRNKDIGTGN DEAINHNLLT DNSNGESNIS 540 SKNNEGQPDW KMVLYQSSEQ QLEQKEPNIT ENYKTQTFSL APQNVAGIDT ISSGQREADD 600 SSKMGTYLSN ASSSVTRLSS SREVIPDRSS LPMSFAMPPP ATKLFTSSAN AVNSWIPSAQ 660 LRPALSMPHM SVFAAWTDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-133 | AP2 family protein |