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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022751135.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 515aa MW: 56799.8 Da PI: 6.0897 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.5 | 4.4e-15 | 231 | 290 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022751135.1 231 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEEKAARAYDLAALKYWG 290 57*******************666664478446*************************98 PP | |||||||
2 | AP2 | 49.8 | 8.6e-16 | 333 | 384 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022751135.1 333 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 384 57****************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 515 aa Download sequence |
MAPASNWLSF SLSPMEMLRS SSEPQFMAHE GSSAAASSHY LIDNFYANGW TNSKHQMFLT 60 EGEDNQSKEA RSPAMDDEHP ILTSFHQQAP KLEDFLGDSS SIVRYSDSQA ETQDSSLTQI 120 YDHSGSAYFN EHQDLKAITG FPAFSTNSGS EVDDSASMGR TRLTAVEFPG QSIESSGTEL 180 GFSDCPTAGN LSLGVNQSCE DNNNSTNNKA IVSVDTNCSK KNDETLGQRT SIYRGVTRHR 240 WTGRYEAHLW DNSCRREGQA RKGRQVYLGG YDKEEKAARA YDLAALKYWG PTATTNFSIS 300 NYSKELEEMK HVTKQEFLAS LRRKSSGFSR GASIYRGVTR HHQQGRWQAR IGRVAGNKDL 360 YLGTFATEEE AAEAYDIAAI KFRGVNAVTN FEMNRYDVAT IAKSSLPIGG AAKRLKLSLE 420 SELKPIVNHE QQSLCSSNSN SISFAPLEPI SAIPCGIPFD TAAAAAFYQQ DLYHHLQTAN 480 IGISDLPGSS STMATPMMVM PQPAAEFFLW PHQSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10510.2 | 0.0 | AP2 family protein |