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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022746131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 417aa MW: 46492.8 Da PI: 8.3272 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.8 | 2.7e-13 | 64 | 120 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g XP_022746131.1 64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 120 57*******************6666777775555599******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 417 aa Download sequence |
MASTSSSEPG MKAEASGGEN SETVIANDQL LLYRGLKKAK KERGCTAKER ISKMPPCTAG 60 KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQGA YDDEEAAARA YDLAALKYWG 120 PGTLINFPVT DYTRDLEEMQ NVSREEYLAS LRRKSSGFSR GISKYRGLSS RWDSSFGRVA 180 GSEYFNSIHY SDDPTIESDY IGGFCIERKI DLTGHIKWWA TNKTRQAEHG SKSSEETKHA 240 CPEDIGSELK TSEWAVQPTE PYQMPRLGTS LEGTKHKGSC VSALSILSRS PDFENLQEKA 300 RKKQEKNADN DENENKNTIN KMDHGKAVEK SENQGTGSER LGATLGMRGG LSLQKNVLPL 360 TPFLSAPLLT NYNTIDSLVD PVLWTSLVPV LPSGPSCNPE VTKTETSSSY TFFRPEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-157 | AP2 family protein |