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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022746127.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 422aa MW: 47024.4 Da PI: 8.3238 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 3.8e-17 | 64 | 123 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_022746127.1 64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 123 57*******************766644468557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 422 aa Download sequence |
MASTSSSEPG MKAEASGGEN SETVIANDQL LLYRGLKKAK KERGCTAKER ISKMPPCTAG 60 KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK 120 YWGPGTLINF PVTDYTRDLE EMQNVSREEY LASLRRKSSG FSRGISKYRG LSSRWDSSFG 180 RVAGSEYFNS IHYSDDPTIE SDYIGGFCIE RKIDLTGHIK WWATNKTRQA EHGSKSSEET 240 KHACPEDIGS ELKTSEWAVQ PTEPYQMPRL GTSLEGTKHK GSCVSALSIL SRSPDFENLQ 300 EKARKKQEKN ADNDENENKN TINKMDHGKA VEKSENQGTG SERLGATLGM RGGLSLQKNV 360 LPLTPFLSAP LLTNYNTIDS LVDPVLWTSL VPVLPSGPSC NPEVGVTKTE TSSSYTFFRP 420 EE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-159 | AP2 family protein |