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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022745051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 418aa MW: 46606.1 Da PI: 9.3351 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 3.7e-17 | 64 | 123 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_022745051.1 64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 123 57*******************766644468557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence |
MSSTSLSDPG MKAEASGGEN SETVIANDQL LLYKGLKKAK KERGCTAKER ISKMPPCTAG 60 KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK 120 YWGPGTLINF PVADYTRDLE EMQNLSREDY LASLRRKSSG FSRGISKYRG LSSRWDSSFR 180 RVAASEYFKG IPYSDDPATE SDYLGGLCIE RKIDLTSYIK WWGTNKTRQA ESGTKSSEET 240 RRACPEDIGS ELKTPEWAVQ PTEPYQLPRL GTSLEGTKRK GSPVSALSIL SRSADFKSLQ 300 EKALKKQEKT ADNDENENKN TTNKIDHGKA PEKSVNHDSD RLGPTLGVSG GLSLQKNVFP 360 LTPFLSAPLL TNYNTIDSLV DPVLWTSLVP VLPTGPSRNP EVTKTETSST YTLFRPEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-150 | AP2 family protein |