PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745048.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 421aa MW: 46849.4 Da PI: 9.3351

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.1	3.8e-17	64	123	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_022745048.1 64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 123 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MSSTSLSDPG MKAEASGGEN SETVIANDQL LLYKGLKKAK KERGCTAKER ISKMPPCTAG 60 KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK 120 YWGPGTLINF PVADYTRDLE EMQNLSREDY LASLRRKSSG FSRGISKYRG LSSSRWDSSF 180 RRVAASEYFK GIPYSDDPAT ESDYLGGLCI ERKIDLTSYI KWWGTNKTRQ AESGTKSSEE 240 TRRACPEDIG SELKTPEWAV QPTEPYQLPR LGTSLEGTKR KGSPVSALSI LSRSADFKSL 300 QEKALKKQEK TADNDENENK NTTNKIDHGK APEKSVNHDS DRLGPTLGVS GGLSLQKNVF 360 PLTPFLSAPL LTNYNTIDSL VDPVLWTSLV PVLPTGPSRN PEVGVTKTET SSTYTLFRPE 420 E

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MSSTSLSDPG MKAEASGGEN SETVIANDQL LLYKGLKKAK KERGCTAKER ISKMPPCTAG  60
KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK  120
YWGPGTLINF PVADYTRDLE EMQNLSREDY LASLRRKSSG FSRGISKYRG LSSSRWDSSF  180
RRVAASEYFK GIPYSDDPAT ESDYLGGLCI ERKIDLTSYI KWWGTNKTRQ AESGTKSSEE  240
TRRACPEDIG SELKTPEWAV QPTEPYQLPR LGTSLEGTKR KGSPVSALSI LSRSADFKSL  300
QEKALKKQEK TADNDENENK NTTNKIDHGK APEKSVNHDS DRLGPTLGVS GGLSLQKNVF  360
PLTPFLSAPL LTNYNTIDSL VDPVLWTSLV PVLPTGPSRN PEVGVTKTET SSTYTLFRPE  420
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-146	AP2 family protein