PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743368.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 477aa MW: 52589.8 Da PI: 6.5173

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.1	1.9e-17	159	208	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta+ Aa+a+++a+ k++g XP_022743368.1 159 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAQAAARAYDRAAIKFRG 208 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MLDLNLSVTS VGDVSVEMAG ENHDIYGYNN NNRMESSGSF DSSIVHADTT TTTGDDGSSS 60 NAAGTDAFAY SFGILKAAQD EEPENNNTTI PLFPVNVEGD GGKSTGLSQK EWLDLGGSLE 120 ASEHGGGGAE ERIVAQQEQQ VQLRQQVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC 180 GKQVYLGGFD TAQAAARAYD RAAIKFRGVD ADINFNVSDY EDDIKQMRNF TKEEFVHILR 240 RQSTGFSRGS SKYRGVTLHK CGRWEARMGQ FLGKKAYDKA ALKCNGREAV TNFEPSTYEG 300 ELISESENGD QNQGLDLNLG IAPPFTSDPQ RVNDNSRNFA FQHVWDGLPL ERGARIENSA 360 PAIMRVQPSP GQAMAFKHVP NWNGSNPTSF PHYRERATEK RIEVDSSTNW AWQIQGPYVG 420 ANPLPLFPTA ASSGFSSSTI TSPSAAAGQL RLPSTTFLHH YPPVITNPNI SHFYCRS

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MLDLNLSVTS VGDVSVEMAG ENHDIYGYNN NNRMESSGSF DSSIVHADTT TTTGDDGSSS  60
NAAGTDAFAY SFGILKAAQD EEPENNNTTI PLFPVNVEGD GGKSTGLSQK EWLDLGGSLE  120
ASEHGGGGAE ERIVAQQEQQ VQLRQQVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC  180
GKQVYLGGFD TAQAAARAYD RAAIKFRGVD ADINFNVSDY EDDIKQMRNF TKEEFVHILR  240
RQSTGFSRGS SKYRGVTLHK CGRWEARMGQ FLGKKAYDKA ALKCNGREAV TNFEPSTYEG  300
ELISESENGD QNQGLDLNLG IAPPFTSDPQ RVNDNSRNFA FQHVWDGLPL ERGARIENSA  360
PAIMRVQPSP GQAMAFKHVP NWNGSNPTSF PHYRERATEK RIEVDSSTNW AWQIQGPYVG  420
ANPLPLFPTA ASSGFSSSTI TSPSAAAGQL RLPSTTFLHH YPPVITNPNI SHFYCRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.1	1e-95	AP2 family protein