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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022742186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 893aa MW: 99745 Da PI: 6.5271 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.2 | 3e-11 | 551 | 603 | 8 | 55 |
AP2 8 wdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 +++++gr++A+++d s+n+ k+ ++++lg ++++e Aa+ ++ a++k++g XP_022742186.1 551 RHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDSEEAAARTYDLAALKYWG 603 799***********777799977447*************************98 PP | |||||||
2 | AP2 | 54.6 | 2.6e-17 | 646 | 697 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg+++t eeAa+a++ a+++++g XP_022742186.1 646 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYDTQEEAAAAYDMAALEYRG 697 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 893 aa Download sequence |
MAASSTFESS LRRGSQTTTT TSRKTTPSSS GSSRRAATAP FRRSRSVSAF SRASHSDFSE 60 FSIKTDNPLF DNNSNDDALF PNSILKSDQI TSKTKHKAVA ADDYGNRRGR SISRVGPDGR 120 HVSGSGNSKE SSRSLSIVDT RRRGRSVSRT PLSRTRFAAS ETEMEQEGNL WMKSRDKGNL 180 SATSGNGSKG NLVRSSSSLT RSSQRKPIDP LDASPKSLSR LKTAKLDGAI STSSFSEDEL 240 MDSFQGDNLV GDATAASDIY RTVKSEVRRA ISDIQNELEN AIRSNATTGV AEIPPDLVNP 300 GAVELVSDIQ REYATKLEQS QERARQLRTD LAVEEYRGME LSRILKEVLP DAKTPSTKKS 360 RSGRKSSIER RKISKCLTED ALAYFDECVS LSTFDGSDFS SLEDPPPKLV GVGNLDGDGI 420 SLLHANSNIP GSNCPSNYLH DKQECQFTYN HDPFDLTASN GCMEQSRDQL SLNSSDGEWN 480 KNFKFSFSSK PGQICELQQD IKKYVKGFEK DKRKIDIDSQ ITSRSSYDPA EYKFQASQQS 540 LLFDHVFLKN RHRWTGRFEA HLWDKSSWNN IQNKKGRQVY LGAYDSEEAA ARTYDLAALK 600 YWGPDTTLNF PIDRYEKEIE EMKKVSKEEY LASLRRRSSG FSRGVSKYRG VARHHHNGRW 660 EARIGRVFGN KYLYLGTYDT QEEAAAAYDM AALEYRGTNA VTNFDVSHYI ERLKQKGISF 720 LDQPQEQIPD TAAEVEQPQQ QQQQQQQEQQ QQQREEAHKP QHFQYMPMHL PLCVDNATIA 780 GMETTGSNEL AWSFCMDSGL TSFLVPDFPL LKTDELPNLF DDTGFEDNID LIFEVGPNQN 840 EANRECVSGY ASSGAMNIEE DNGKERLLSS SSSSSLADSP YSLTTSVSCN YSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 1e-91 | AP2 family protein |